Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXD2O60548 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXD2O60548 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXD2O60548 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXD2O60548 AC112482.1-201ENST00000492080 688 ntBASIC18.05■□□□□ 0.48
FOXD2O60548 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 AC002347.1-201ENST00000569543 541 ntBASIC18.05■□□□□ 0.48
FOXD2O60548 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
FOXD2O60548 Z83851.2-201ENST00000609564 659 ntBASIC18.05■□□□□ 0.48
FOXD2O60548 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXD2O60548 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXD2O60548 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
FOXD2O60548 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
FOXD2O60548 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.04■□□□□ 0.48
FOXD2O60548 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
FOXD2O60548 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXD2O60548 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXD2O60548 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXD2O60548 AC134684.3-201ENST00000641758 218 ntBASIC18.04■□□□□ 0.48
FOXD2O60548 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
FOXD2O60548 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXD2O60548 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
FOXD2O60548 AL512353.2-201ENST00000448759 1962 ntBASIC18.04■□□□□ 0.48
FOXD2O60548 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXD2O60548 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXD2O60548 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 AL691432.2-201ENST00000607222 2038 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
FOXD2O60548 HNRNPDP1-201ENST00000439535 754 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXD2O60548 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 AC009533.2-201ENST00000543664 586 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 AC034105.1-201ENST00000563488 319 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXD2O60548 MTDHP5-201ENST00000598980 586 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXD2O60548 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXD2O60548 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.03■□□□□ 0.48
FOXD2O60548 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXD2O60548 AC008556.1-201ENST00000610908 2040 ntBASIC18.03■□□□□ 0.48
FOXD2O60548 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
FOXD2O60548 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXD2O60548 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
FOXD2O60548 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
FOXD2O60548 AC135050.7-201ENST00000624508 2218 ntBASIC18.02■□□□□ 0.48
FOXD2O60548 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXD2O60548 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms