Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TBC1D3FA6NER0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TBC1D3FA6NER0 AC097374.2-201ENST00000618617 1306 ntBASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 RPS2P28-201ENST00000314255 741 ntBASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 FAM220CP-201ENST00000395253 831 ntBASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 AF228730.7-201ENST00000641842 219 ntBASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TBC1D3FA6NER0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 AC007967.3-201ENST00000434308 558 ntBASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 AC018712.1-201ENST00000455767 687 ntBASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.82■□□□□ 0.44
TBC1D3FA6NER0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 AC022898.2-201ENST00000616822 1312 ntBASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 AC093010.1-201ENST00000473625 1624 ntBASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.81■□□□□ 0.44
TBC1D3FA6NER0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms