Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 LINC01568-207ENST00000641790 1380 ntBASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 DUTP2-201ENST00000519164 463 ntBASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 AC141586.5-201ENST00000624546 2050 ntBASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV27A0A087WT01 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 ECEL1P3-201ENST00000427961 737 ntBASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 LINC00602-201ENST00000629776 2065 ntBASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
TRAV27A0A087WT01 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 AL596275.1-201ENST00000423464 877 ntBASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV27A0A087WT01 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 AC108860.2-201ENST00000562760 2183 ntBASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRAV27A0A087WT01 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV27A0A087WT01 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms