Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 RARRES2P6-201ENST00000567333 442 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 AC008694.1-202ENST00000636953 945 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 AC105917.1-201ENST00000506637 2539 ntBASIC16.93■□□□□ 0.3
NR1H4Q96RI1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 AC026271.2-201ENST00000428091 497 ntBASIC16.93■□□□□ 0.3
NR1H4Q96RI1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 C2orf69P4-201ENST00000565394 541 ntBASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NR1H4Q96RI1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 AC006449.5-201ENST00000610658 2098 ntBASIC16.92■□□□□ 0.3
NR1H4Q96RI1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 AL355472.2-201ENST00000422958 438 ntBASIC16.92■□□□□ 0.3
NR1H4Q96RI1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 AC069236.1-201ENST00000604339 616 ntBASIC16.92■□□□□ 0.3
NR1H4Q96RI1 BID-214ENST00000617586 542 ntTSL 5 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NR1H4Q96RI1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NR1H4Q96RI1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms