Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM20Q8N5G0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SMIM20Q8N5G0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC11.19□□□□□ -0.62
SMIM20Q8N5G0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 AC073347.1-201ENST00000421633 2643 ntBASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM20Q8N5G0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 AC005224.4-201ENST00000583262 1652 ntBASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SUZ12P1-203ENST00000578195 985 ntBASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 AC106886.4-201ENST00000623557 2502 ntBASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM20Q8N5G0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms