Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.87■□□□□ 0.61
USP46P62068 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
USP46P62068 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
USP46P62068 AC104581.1-202ENST00000635932 2618 ntBASIC18.87■□□□□ 0.61
USP46P62068 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USP46P62068 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 AC093677.2-201ENST00000600169 1863 ntBASIC18.86■□□□□ 0.61
USP46P62068 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.86■□□□□ 0.61
USP46P62068 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 AC125634.1-201ENST00000438758 1403 ntBASIC18.86■□□□□ 0.61
USP46P62068 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 RCN1P2-201ENST00000398357 915 ntBASIC18.86■□□□□ 0.61
USP46P62068 POM121L3P-201ENST00000419331 1163 ntBASIC18.86■□□□□ 0.61
USP46P62068 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.86■□□□□ 0.61
USP46P62068 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.86■□□□□ 0.61
USP46P62068 MIR5100-201ENST00000579544 119 ntBASIC18.86■□□□□ 0.61
USP46P62068 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 AC104692.2-201ENST00000603054 253 ntBASIC18.86■□□□□ 0.61
USP46P62068 AC114341.1-201ENST00000618070 349 ntBASIC18.86■□□□□ 0.61
USP46P62068 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP46P62068 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
USP46P62068 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
USP46P62068 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.85■□□□□ 0.61
USP46P62068 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 TP73-AS1-210ENST00000637775 1455 ntBASIC18.85■□□□□ 0.61
USP46P62068 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.85■□□□□ 0.61
USP46P62068 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 AL096828.2-201ENST00000567259 1965 ntBASIC18.85■□□□□ 0.61
USP46P62068 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
USP46P62068 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.85■□□□□ 0.61
USP46P62068 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 FAAHP1-202ENST00000446499 1238 ntBASIC18.85■□□□□ 0.61
USP46P62068 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.85■□□□□ 0.61
USP46P62068 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
USP46P62068 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.85■□□□□ 0.61
USP46P62068 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.85■□□□□ 0.61
USP46P62068 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.85■□□□□ 0.61
USP46P62068 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.85■□□□□ 0.61
USP46P62068 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.85■□□□□ 0.61
USP46P62068 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.85■□□□□ 0.61
USP46P62068 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP46P62068 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
USP46P62068 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP46P62068 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP46P62068 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
USP46P62068 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.84■□□□□ 0.61
USP46P62068 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP46P62068 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.84■□□□□ 0.61
USP46P62068 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.84■□□□□ 0.61
USP46P62068 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms