Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.29■□□□□ 0.84
USP11P51784 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
USP11P51784 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.29■□□□□ 0.84
USP11P51784 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
USP11P51784 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.29■□□□□ 0.84
USP11P51784 MINOS1P3-201ENST00000457048 203 ntBASIC20.29■□□□□ 0.84
USP11P51784 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.29■□□□□ 0.84
USP11P51784 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.29■□□□□ 0.84
USP11P51784 AC009533.2-201ENST00000543664 586 ntBASIC20.29■□□□□ 0.84
USP11P51784 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.29■□□□□ 0.84
USP11P51784 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.29■□□□□ 0.84
USP11P51784 AC116407.2-201ENST00000613639 860 ntBASIC20.29■□□□□ 0.84
USP11P51784 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.29■□□□□ 0.84
USP11P51784 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.29■□□□□ 0.84
USP11P51784 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
USP11P51784 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP11P51784 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
USP11P51784 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.28■□□□□ 0.84
USP11P51784 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
USP11P51784 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.28■□□□□ 0.84
USP11P51784 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.28■□□□□ 0.84
USP11P51784 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.28■□□□□ 0.84
USP11P51784 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.28■□□□□ 0.84
USP11P51784 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.28■□□□□ 0.84
USP11P51784 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP11P51784 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP11P51784 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
USP11P51784 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP11P51784 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP11P51784 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.27■□□□□ 0.84
USP11P51784 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP11P51784 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP11P51784 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.27■□□□□ 0.84
USP11P51784 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.27■□□□□ 0.84
USP11P51784 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.27■□□□□ 0.84
USP11P51784 CLEC4GP1-201ENST00000596555 870 ntBASIC20.27■□□□□ 0.84
USP11P51784 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
USP11P51784 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USP11P51784 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP11P51784 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP11P51784 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.27■□□□□ 0.83
USP11P51784 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP11P51784 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.27■□□□□ 0.83
USP11P51784 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP11P51784 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
USP11P51784 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.26■□□□□ 0.83
USP11P51784 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP11P51784 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.26■□□□□ 0.83
USP11P51784 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.26■□□□□ 0.83
USP11P51784 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.26■□□□□ 0.83
USP11P51784 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.26■□□□□ 0.83
USP11P51784 BNIP3P18-201ENST00000593976 575 ntBASIC20.26■□□□□ 0.83
USP11P51784 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms