Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CNN2P11-201ENST00000429351 262 ntBASIC31.21■■■□□ 2.59
TOP2AP11388 AC018445.3-201ENST00000624177 1945 ntBASIC31.21■■■□□ 2.59
TOP2AP11388 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC31.21■■■□□ 2.59
TOP2AP11388 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
TOP2AP11388 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
TOP2AP11388 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TOP2AP11388 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
TOP2AP11388 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
TOP2AP11388 MRPL20P1-201ENST00000400819 433 ntBASIC31.2■■■□□ 2.59
TOP2AP11388 ATP6V0CP3-201ENST00000417255 467 ntBASIC31.2■■■□□ 2.59
TOP2AP11388 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
TOP2AP11388 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
TOP2AP11388 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC31.2■■■□□ 2.59
TOP2AP11388 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC31.2■■■□□ 2.59
TOP2AP11388 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC31.2■■■□□ 2.59
TOP2AP11388 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC31.2■■■□□ 2.59
TOP2AP11388 AC004790.2-201ENST00000623588 572 ntBASIC31.2■■■□□ 2.59
TOP2AP11388 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC31.2■■■□□ 2.59
TOP2AP11388 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
TOP2AP11388 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
TOP2AP11388 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC31.19■■■□□ 2.58
TOP2AP11388 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC31.19■■■□□ 2.58
TOP2AP11388 ADH5P3-201ENST00000433842 1137 ntBASIC31.19■■■□□ 2.58
TOP2AP11388 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC31.19■■■□□ 2.58
TOP2AP11388 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC31.19■■■□□ 2.58
TOP2AP11388 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC31.19■■■□□ 2.58
TOP2AP11388 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
TOP2AP11388 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
TOP2AP11388 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC31.19■■■□□ 2.58
TOP2AP11388 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC31.19■■■□□ 2.58
TOP2AP11388 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 PC-214ENST00000628663 1470 ntTSL 5 BASIC31.18■■■□□ 2.58
TOP2AP11388 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC31.18■■■□□ 2.58
TOP2AP11388 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC31.18■■■□□ 2.58
TOP2AP11388 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC31.18■■■□□ 2.58
TOP2AP11388 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC31.18■■■□□ 2.58
TOP2AP11388 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 PON3-203ENST00000427422 894 ntTSL 3 BASIC31.18■■■□□ 2.58
TOP2AP11388 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC31.18■■■□□ 2.58
TOP2AP11388 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC31.18■■■□□ 2.58
TOP2AP11388 RPL28-205ENST00000558131 444 ntTSL 5 BASIC31.18■■■□□ 2.58
TOP2AP11388 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC31.18■■■□□ 2.58
TOP2AP11388 TMED1-207ENST00000591695 809 ntTSL 5 BASIC31.18■■■□□ 2.58
TOP2AP11388 AL353135.1-201ENST00000606729 504 ntBASIC31.18■■■□□ 2.58
TOP2AP11388 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TOP2AP11388 AC009336.1-201ENST00000608941 1553 ntBASIC31.17■■■□□ 2.58
TOP2AP11388 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TOP2AP11388 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC31.17■■■□□ 2.58
TOP2AP11388 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TOP2AP11388 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC31.17■■■□□ 2.58
TOP2AP11388 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TOP2AP11388 KRT19P2-202ENST00000557173 1012 ntBASIC31.17■■■□□ 2.58
TOP2AP11388 ORC5-208ENST00000626700 344 ntTSL 3 BASIC31.17■■■□□ 2.58
TOP2AP11388 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC31.17■■■□□ 2.58
TOP2AP11388 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC31.17■■■□□ 2.58
TOP2AP11388 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TOP2AP11388 CROCCP3-202ENST00000420820 1947 ntBASIC31.17■■■□□ 2.58
TOP2AP11388 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TOP2AP11388 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC31.16■■■□□ 2.58
TOP2AP11388 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 STOM-202ENST00000347359 870 ntTSL 2 BASIC31.16■■■□□ 2.58
TOP2AP11388 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 PNMT-202ENST00000394246 821 ntTSL 2 BASIC31.16■■■□□ 2.58
TOP2AP11388 RHOQP3-201ENST00000437982 621 ntBASIC31.16■■■□□ 2.58
TOP2AP11388 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TOP2AP11388 AP002414.1-201ENST00000391405 1147 ntBASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms