Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.79■□□□□ 0.12
UBCP0CG48 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBCP0CG48 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
UBCP0CG48 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.78■□□□□ 0.12
UBCP0CG48 MIR718-201ENST00000390190 70 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
UBCP0CG48 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.78■□□□□ 0.12
UBCP0CG48 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.78■□□□□ 0.12
UBCP0CG48 DUTP2-201ENST00000519164 463 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.78■□□□□ 0.12
UBCP0CG48 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.78■□□□□ 0.12
UBCP0CG48 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.78■□□□□ 0.12
UBCP0CG48 FITM1-202ENST00000559294 800 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 C2orf69P3-201ENST00000565542 1120 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.78■□□□□ 0.12
UBCP0CG48 AC010240.3-201ENST00000607688 395 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.78■□□□□ 0.12
UBCP0CG48 AC010653.2-201ENST00000623505 997 ntBASIC15.78■□□□□ 0.12
UBCP0CG48 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
UBCP0CG48 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
UBCP0CG48 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.78■□□□□ 0.12
UBCP0CG48 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
UBCP0CG48 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBCP0CG48 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
UBCP0CG48 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
UBCP0CG48 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.77■□□□□ 0.12
UBCP0CG48 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.77■□□□□ 0.12
UBCP0CG48 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.77■□□□□ 0.12
UBCP0CG48 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.77■□□□□ 0.12
UBCP0CG48 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.77■□□□□ 0.12
UBCP0CG48 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.77■□□□□ 0.12
UBCP0CG48 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.77■□□□□ 0.12
UBCP0CG48 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.77■□□□□ 0.12
UBCP0CG48 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 AC007663.1-201ENST00000438948 1240 ntBASIC15.77■□□□□ 0.12
UBCP0CG48 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBCP0CG48 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.77■□□□□ 0.12
UBCP0CG48 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.77■□□□□ 0.12
UBCP0CG48 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.77■□□□□ 0.12
UBCP0CG48 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
UBCP0CG48 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.77■□□□□ 0.11
UBCP0CG48 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
UBCP0CG48 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBCP0CG48 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
UBCP0CG48 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
UBCP0CG48 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
UBCP0CG48 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
UBCP0CG48 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBCP0CG48 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms