Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM16O95361 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM16O95361 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM16O95361 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
TRIM16O95361 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM16O95361 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 HLA-F-220ENST00000434407 884 ntBASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 TOB2P1-201ENST00000469761 992 ntBASIC18.21■□□□□ 0.51
TRIM16O95361 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM16O95361 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 AL163051.1-201ENST00000569214 1512 ntBASIC18.21■□□□□ 0.51
TRIM16O95361 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM16O95361 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRIM16O95361 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 HLA-A-201ENST00000376802 1334 ntBASIC18.21■□□□□ 0.51
TRIM16O95361 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM16O95361 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM16O95361 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM16O95361 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM16O95361 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM16O95361 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRIM16O95361 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM16O95361 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 MIR662-201ENST00000384847 95 ntBASIC18.2■□□□□ 0.5
TRIM16O95361 MRPL3P1-201ENST00000400109 1033 ntBASIC18.2■□□□□ 0.5
TRIM16O95361 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM16O95361 AC104390.1-201ENST00000555663 520 ntBASIC18.2■□□□□ 0.5
TRIM16O95361 AL671883.3-201ENST00000603274 991 ntBASIC18.2■□□□□ 0.5
TRIM16O95361 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM16O95361 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM16O95361 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM16O95361 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM16O95361 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM16O95361 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM16O95361 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16O95361 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM16O95361 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM16O95361 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRIM16O95361 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM16O95361 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM16O95361 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM16O95361 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms