Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VTA1Q9NP79 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.06■□□□□ 0.8
VTA1Q9NP79 CROCCP3-202ENST00000420820 1947 ntBASIC20.06■□□□□ 0.8
VTA1Q9NP79 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 COX5BP2-201ENST00000392354 334 ntBASIC20.05■□□□□ 0.8
VTA1Q9NP79 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 UNC93B6-202ENST00000528242 690 ntBASIC20.05■□□□□ 0.8
VTA1Q9NP79 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.05■□□□□ 0.8
VTA1Q9NP79 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VTA1Q9NP79 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 SPDYE21P-201ENST00000413323 827 ntBASIC20.04■□□□□ 0.8
VTA1Q9NP79 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VTA1Q9NP79 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VTA1Q9NP79 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 KRT18P3-201ENST00000451602 1288 ntBASIC20.03■□□□□ 0.8
VTA1Q9NP79 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 AC006557.2-201ENST00000592985 1240 ntBASIC20.03■□□□□ 0.8
VTA1Q9NP79 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.03■□□□□ 0.8
VTA1Q9NP79 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTA1Q9NP79 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 KRT18P27-201ENST00000427733 1299 ntBASIC20.02■□□□□ 0.8
VTA1Q9NP79 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTA1Q9NP79 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.02■□□□□ 0.8
VTA1Q9NP79 AC073592.5-201ENST00000624854 528 ntBASIC20.02■□□□□ 0.8
VTA1Q9NP79 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms