Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 KRT8P7-201ENST00000533003 1432 ntBASIC20.1■□□□□ 0.81
CBX8Q9HC52 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 C1QBPP2-201ENST00000528754 825 ntBASIC20.09■□□□□ 0.81
CBX8Q9HC52 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 AC006058.3-201ENST00000606217 1069 ntBASIC20.09■□□□□ 0.81
CBX8Q9HC52 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 HLA-J-201ENST00000462773 1622 ntBASIC20.09■□□□□ 0.81
CBX8Q9HC52 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.09■□□□□ 0.81
CBX8Q9HC52 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CBX8Q9HC52 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 AC106886.4-201ENST00000623557 2502 ntBASIC20.08■□□□□ 0.81
CBX8Q9HC52 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CBX8Q9HC52 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CBX8Q9HC52 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CBX8Q9HC52 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CBX8Q9HC52 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CBX8Q9HC52 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CBX8Q9HC52 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.07■□□□□ 0.8
CBX8Q9HC52 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 DGCR10-201ENST00000609839 495 ntBASIC20.07■□□□□ 0.8
CBX8Q9HC52 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CBX8Q9HC52 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.07■□□□□ 0.8
CBX8Q9HC52 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms