Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 TP73-AS1-210ENST00000637775 1455 ntBASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATXN3LQ9H3M9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 AC064862.7-201ENST00000604520 867 ntBASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 TP73-AS1-207ENST00000624167 988 ntBASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATXN3LQ9H3M9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 HLA-A-201ENST00000376802 1334 ntBASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 FAM197Y8-203ENST00000450145 560 ntBASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 AC009533.2-201ENST00000543664 586 ntBASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATXN3LQ9H3M9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
ATXN3LQ9H3M9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATXN3LQ9H3M9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.85■□□□□ 0.61
ATXN3LQ9H3M9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATXN3LQ9H3M9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATXN3LQ9H3M9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATXN3LQ9H3M9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms