Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 FOSL1P1-201ENST00000511041 816 ntBASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 AC009533.2-201ENST00000543664 586 ntBASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 KRT18P55-202ENST00000578578 1546 ntBASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 KRT126P-201ENST00000549467 1181 ntBASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.96■□□□□ 0.47
ECHDC3Q96DC8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
ECHDC3Q96DC8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.96■□□□□ 0.46
ECHDC3Q96DC8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AC011467.2-201ENST00000598425 242 ntBASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AC138894.3-201ENST00000603787 634 ntBASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AL121772.3-201ENST00000610840 674 ntBASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AC114341.1-201ENST00000618070 349 ntBASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 TP73-AS1-210ENST00000637775 1455 ntBASIC17.95■□□□□ 0.46
ECHDC3Q96DC8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ECHDC3Q96DC8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms