Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 BX088651.1-201ENST00000540551 451 ntBASIC15.73■□□□□ 0.11
C11orf88Q6PI97 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 MYC-208ENST00000641036 567 ntBASIC15.73■□□□□ 0.11
C11orf88Q6PI97 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
C11orf88Q6PI97 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 SLC25A6P5-201ENST00000435663 894 ntBASIC15.72■□□□□ 0.11
C11orf88Q6PI97 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 YBX1P10-201ENST00000444752 975 ntBASIC15.72■□□□□ 0.11
C11orf88Q6PI97 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.72■□□□□ 0.11
C11orf88Q6PI97 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.71■□□□□ 0.11
C11orf88Q6PI97 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 AC113410.3-201ENST00000623366 203 ntBASIC15.71■□□□□ 0.11
C11orf88Q6PI97 AP006587.1-201ENST00000534129 1502 ntBASIC15.71■□□□□ 0.11
C11orf88Q6PI97 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
C11orf88Q6PI97 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms