Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
RPL39P62891 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RPL39P62891 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.76□□□□□ -0.37
RPL39P62891 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
RPL39P62891 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.76□□□□□ -0.37
RPL39P62891 SDHAP2-201ENST00000455183 2001 ntBASIC12.76□□□□□ -0.37
RPL39P62891 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.76□□□□□ -0.37
RPL39P62891 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RPL39P62891 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
RPL39P62891 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
RPL39P62891 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
RPL39P62891 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.75□□□□□ -0.37
RPL39P62891 KRT16P5-201ENST00000455284 522 ntBASIC12.75□□□□□ -0.37
RPL39P62891 AC093010.1-201ENST00000473625 1624 ntBASIC12.75□□□□□ -0.37
RPL39P62891 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.75□□□□□ -0.37
RPL39P62891 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.75□□□□□ -0.37
RPL39P62891 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.75□□□□□ -0.37
RPL39P62891 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.75□□□□□ -0.37
RPL39P62891 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.75□□□□□ -0.37
RPL39P62891 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 AC034236.2-201ENST00000606662 1610 ntBASIC12.75□□□□□ -0.37
RPL39P62891 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.75□□□□□ -0.37
RPL39P62891 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RPL39P62891 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 KRASP1-201ENST00000407852 552 ntBASIC12.74□□□□□ -0.37
RPL39P62891 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RPL39P62891 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.74□□□□□ -0.37
RPL39P62891 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.74□□□□□ -0.37
RPL39P62891 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 AC008622.2-201ENST00000617006 1229 ntBASIC12.74□□□□□ -0.37
RPL39P62891 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.74□□□□□ -0.37
RPL39P62891 AL023875.1-201ENST00000640777 796 ntBASIC12.74□□□□□ -0.37
RPL39P62891 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RPL39P62891 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RPL39P62891 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms