Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.95■□□□□ 0.62
GRIK1P39086 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
GRIK1P39086 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 EMBP1-201ENST00000458200 901 ntBASIC18.94■□□□□ 0.62
GRIK1P39086 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.94■□□□□ 0.62
GRIK1P39086 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.94■□□□□ 0.62
GRIK1P39086 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.94■□□□□ 0.62
GRIK1P39086 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.94■□□□□ 0.62
GRIK1P39086 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.94■□□□□ 0.62
GRIK1P39086 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.94■□□□□ 0.62
GRIK1P39086 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.94■□□□□ 0.62
GRIK1P39086 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.94■□□□□ 0.62
GRIK1P39086 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GRIK1P39086 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.94■□□□□ 0.62
GRIK1P39086 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GRIK1P39086 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.93■□□□□ 0.62
GRIK1P39086 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GRIK1P39086 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GRIK1P39086 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.93■□□□□ 0.62
GRIK1P39086 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.93■□□□□ 0.62
GRIK1P39086 AC009533.2-201ENST00000543664 586 ntBASIC18.93■□□□□ 0.62
GRIK1P39086 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 MIR5100-201ENST00000579544 119 ntBASIC18.93■□□□□ 0.62
GRIK1P39086 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
GRIK1P39086 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.93■□□□□ 0.62
GRIK1P39086 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GRIK1P39086 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GRIK1P39086 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GRIK1P39086 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 TP73-AS1-210ENST00000637775 1455 ntBASIC18.92■□□□□ 0.62
GRIK1P39086 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
GRIK1P39086 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.92■□□□□ 0.62
GRIK1P39086 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 AL591684.3-201ENST00000605187 298 ntBASIC18.92■□□□□ 0.62
GRIK1P39086 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
GRIK1P39086 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 AC022898.2-201ENST00000616822 1312 ntBASIC18.92■□□□□ 0.62
GRIK1P39086 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.92■□□□□ 0.62
GRIK1P39086 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GRIK1P39086 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
GRIK1P39086 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GRIK1P39086 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
GRIK1P39086 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms