Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC22.7■■□□□ 1.22
COL15A1P39059 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.7■■□□□ 1.22
COL15A1P39059 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
COL15A1P39059 AC010460.3-201ENST00000511359 1579 ntBASIC22.7■■□□□ 1.22
COL15A1P39059 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.7■■□□□ 1.22
COL15A1P39059 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.7■■□□□ 1.22
COL15A1P39059 AC002347.1-201ENST00000569543 541 ntBASIC22.7■■□□□ 1.22
COL15A1P39059 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
COL15A1P39059 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
COL15A1P39059 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
COL15A1P39059 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL15A1P39059 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL15A1P39059 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.69■■□□□ 1.22
COL15A1P39059 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.69■■□□□ 1.22
COL15A1P39059 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 GMCL1P1-201ENST00000463439 1581 ntBASIC22.69■■□□□ 1.22
COL15A1P39059 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.69■■□□□ 1.22
COL15A1P39059 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL15A1P39059 AC097374.2-201ENST00000618617 1306 ntBASIC22.69■■□□□ 1.22
COL15A1P39059 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.69■■□□□ 1.22
COL15A1P39059 AC073621.1-201ENST00000392730 636 ntBASIC22.69■■□□□ 1.22
COL15A1P39059 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.69■■□□□ 1.22
COL15A1P39059 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.69■■□□□ 1.22
COL15A1P39059 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.69■■□□□ 1.22
COL15A1P39059 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.69■■□□□ 1.22
COL15A1P39059 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.69■■□□□ 1.22
COL15A1P39059 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL15A1P39059 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
COL15A1P39059 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.68■■□□□ 1.22
COL15A1P39059 RPS8P6-201ENST00000426177 609 ntBASIC22.68■■□□□ 1.22
COL15A1P39059 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.68■■□□□ 1.22
COL15A1P39059 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.68■■□□□ 1.22
COL15A1P39059 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.68■■□□□ 1.22
COL15A1P39059 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.68■■□□□ 1.22
COL15A1P39059 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL15A1P39059 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
COL15A1P39059 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.67■■□□□ 1.22
COL15A1P39059 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
COL15A1P39059 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
COL15A1P39059 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL15A1P39059 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL15A1P39059 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 AC096633.1-201ENST00000422446 749 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.67■■□□□ 1.22
COL15A1P39059 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.67■■□□□ 1.22
COL15A1P39059 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 MIR3687-2-201ENST00000577708 61 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 AC064836.3-201ENST00000607928 673 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC22.67■■□□□ 1.22
COL15A1P39059 MIR3687-1-201ENST00000614492 61 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 AD001527.2-201ENST00000622994 785 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 AC134684.3-201ENST00000641758 218 ntBASIC22.67■■□□□ 1.22
COL15A1P39059 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.67■■□□□ 1.22
COL15A1P39059 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
COL15A1P39059 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL15A1P39059 ESPNP-201ENST00000270691 2015 ntBASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms