Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ATP5J2-211ENST00000523680 84 ntTSL 310.88□□□□□ -0.673e-13■■■□□ 17.4
RPS3P23396 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.35□□□□□ -1.078e-10■■■□□ 17.4
RPS3P23396 ANXA6-205ENST00000517707 603 ntTSL 210.46□□□□□ -0.734e-6■■■□□ 17.4
RPS3P23396 TNFRSF1A-205ENST00000534885 2069 ntTSL 1 (best)20.14■□□□□ 0.813e-7■■■□□ 17.4
RPS3P23396 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.713e-7■■■□□ 17.4
RPS3P23396 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.69■□□□□ 0.583e-7■■■□□ 17.4
RPS3P23396 TNFRSF1A-216ENST00000543995 1531 ntTSL 514.25□□□□□ -0.133e-7■■■□□ 17.4
RPS3P23396 HSPD1-213ENST00000486181 648 ntTSL 22.97□□□□□ -1.937e-28■■■□□ 17.4
RPS3P23396 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.94■□□□□ 0.628e-8■■■□□ 17.4
RPS3P23396 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.47■□□□□ 0.238e-8■■■□□ 17.4
RPS3P23396 SPNS1-211ENST00000568829 780 ntTSL 516■□□□□ 0.152e-6■■■□□ 17.4
RPS3P23396 ATP6V1G2-DDX39B-203ENST00000480131 552 ntAPPRIS P1 TSL 411.09□□□□□ -0.636e-25■■■□□ 17.4
RPS3P23396 PPP2R1A-204ENST00000462047 561 ntTSL 216.14■□□□□ 0.179e-7■■■□□ 17.4
RPS3P23396 MRPL19-207ENST00000493686 720 ntTSL 215.4■□□□□ 0.064e-7■■■□□ 17.4
RPS3P23396 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.42□□□□□ -0.264e-7■■■□□ 17.4
RPS3P23396 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.644e-7■■■□□ 17.4
RPS3P23396 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.944e-7■■■□□ 17.4
RPS3P23396 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC10.63□□□□□ -0.711e-32■■■□□ 17.4
RPS3P23396 GART-210ENST00000441403 715 ntTSL 320.56■□□□□ 0.882e-6■■■□□ 17.4
RPS3P23396 GART-209ENST00000438059 697 ntTSL 38.15□□□□□ -1.12e-6■■■□□ 17.4
RPS3P23396 SERPINA1-215ENST00000556955 571 ntTSL 413.56□□□□□ -0.247e-59■■■□□ 17.4
RPS3P23396 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-8■■■□□ 17.4
RPS3P23396 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.151e-8■■■□□ 17.4
RPS3P23396 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.21e-8■■■□□ 17.4
RPS3P23396 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.331e-8■■■□□ 17.4
RPS3P23396 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.381e-8■■■□□ 17.4
RPS3P23396 PRKCSH-204ENST00000587290 780 ntTSL 214.5□□□□□ -0.095e-11■■■□□ 17.4
RPS3P23396 SEC24C-206ENST00000634508 549 ntTSL 48.03□□□□□ -1.126e-9■■■□□ 17.4
RPS3P23396 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.121e-27■■■□□ 17.4
RPS3P23396 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.12e-8■■■□□ 17.4
RPS3P23396 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.442e-8■■■□□ 17.4
RPS3P23396 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.556e-8■■■□□ 17.4
RPS3P23396 NDUFA12-203ENST00000546788 563 ntTSL 518.5■□□□□ 0.556e-8■■■□□ 17.4
RPS3P23396 NDUFA12-206ENST00000547986 487 ntTSL 2 BASIC10.57□□□□□ -0.726e-8■■■□□ 17.4
RPS3P23396 NDUFA12-204ENST00000547157 276 ntTSL 2 BASIC10.21□□□□□ -0.776e-8■■■□□ 17.4
RPS3P23396 NDUFA12-209ENST00000552205 813 ntTSL 55.46□□□□□ -1.546e-8■■■□□ 17.4
RPS3P23396 NDUFA12-207ENST00000550187 517 ntTSL 43.07□□□□□ -1.926e-8■■■□□ 17.4
RPS3P23396 NDUFA12-208ENST00000551991 546 ntTSL 52.79□□□□□ -1.966e-8■■■□□ 17.4
RPS3P23396 NDUFA12-202ENST00000538372 472 ntTSL 21.3□□□□□ -2.26e-8■■■□□ 17.4
RPS3P23396 NDUFV1-207ENST00000526169 774 ntTSL 1 (best)19.22■□□□□ 0.672e-7■■■□□ 17.4
RPS3P23396 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.062e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.86■□□□□ 0.772e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.56■□□□□ 0.562e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-205ENST00000464683 495 ntTSL 516.66■□□□□ 0.262e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.86■□□□□ 0.132e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-206ENST00000471877 1766 ntTSL 214.24□□□□□ -0.132e-6■■■□□ 17.4
RPS3P23396 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.98□□□□□ -0.172e-6■■■□□ 17.4
RPS3P23396 CCT2-214ENST00000553169 758 ntTSL 27.45□□□□□ -1.228e-7■■■□□ 17.4
RPS3P23396 BAG6-260ENST00000465348 639 ntTSL 216.92■□□□□ 0.35e-10■■■□□ 17.4
RPS3P23396 BAG6-246ENST00000438149 714 ntTSL 315.74■□□□□ 0.115e-10■■■□□ 17.4
RPS3P23396 DUSP6-205ENST00000548755 567 ntTSL 416.55■□□□□ 0.242e-6■■■□□ 17.4
RPS3P23396 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.53e-32■■■□□ 17.4
RPS3P23396 MYL12A-212ENST00000608786 738 nt21.25■□□□□ 0.994e-8■■■□□ 17.4
RPS3P23396 TSG101-203ENST00000535077 685 ntTSL 319.06■□□□□ 0.644e-8■■■□□ 17.4
RPS3P23396 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.644e-8■■■□□ 17.4
RPS3P23396 TSG101-210ENST00000545247 783 ntTSL 318.23■□□□□ 0.514e-8■■■□□ 17.4
RPS3P23396 TSG101-202ENST00000438874 581 ntTSL 1 (best)17.99■□□□□ 0.474e-8■■■□□ 17.4
RPS3P23396 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.4■□□□□ 0.224e-8■■■□□ 17.4
RPS3P23396 SUMO1-208ENST00000409627 722 ntTSL 316.4■□□□□ 0.224e-8■■■□□ 17.4
RPS3P23396 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.4■□□□□ 0.224e-8■■■□□ 17.4
RPS3P23396 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.19■□□□□ 0.184e-8■■■□□ 17.4
RPS3P23396 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.154e-8■■■□□ 17.4
RPS3P23396 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.14e-8■■■□□ 17.4
RPS3P23396 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.58■□□□□ 0.084e-8■■■□□ 17.4
RPS3P23396 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.084e-8■■■□□ 17.4
RPS3P23396 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.073e-32■■■□□ 17.4
RPS3P23396 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.75□□□□□ -0.054e-8■■■□□ 17.4
RPS3P23396 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.064e-8■■■□□ 17.4
RPS3P23396 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.62□□□□□ -0.074e-8■■■□□ 17.4
RPS3P23396 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.61□□□□□ -0.074e-8■■■□□ 17.4
RPS3P23396 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.54□□□□□ -0.084e-8■■■□□ 17.4
RPS3P23396 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.54□□□□□ -0.084e-8■■■□□ 17.4
RPS3P23396 TSG101-209ENST00000544804 391 ntTSL 314.52□□□□□ -0.094e-8■■■□□ 17.4
RPS3P23396 DMAC2-212ENST00000594660 582 ntTSL 314.21□□□□□ -0.134e-8■■■□□ 17.4
RPS3P23396 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.82□□□□□ -0.24e-8■■■□□ 17.4
RPS3P23396 DMAC2-207ENST00000589503 2317 ntTSL 213.21□□□□□ -0.294e-8■■■□□ 17.4
RPS3P23396 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.19□□□□□ -0.34e-8■■■□□ 17.4
RPS3P23396 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.06□□□□□ -0.324e-8■■■□□ 17.4
RPS3P23396 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.344e-8■■■□□ 17.4
RPS3P23396 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.66□□□□□ -0.384e-8■■■□□ 17.4
RPS3P23396 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC12.59□□□□□ -0.394e-8■■■□□ 17.4
RPS3P23396 MCM4-208ENST00000519470 498 ntTSL 211.24□□□□□ -0.614e-8■■■□□ 17.4
RPS3P23396 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.654e-8■■■□□ 17.4
RPS3P23396 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC10.94□□□□□ -0.664e-8■■■□□ 17.4
RPS3P23396 DHFR-205ENST00000511032 1474 ntTSL 2 BASIC10.61□□□□□ -0.713e-32■■■□□ 17.4
RPS3P23396 MYL12A-211ENST00000585090 614 ntTSL 310.21□□□□□ -0.775e-15■■■□□ 17.4
RPS3P23396 MYL12A-210ENST00000583449 334 ntTSL 29.68□□□□□ -0.867e-15■■■□□ 17.4
RPS3P23396 FST-205ENST00000504226 705 ntTSL 39.55□□□□□ -0.884e-8■■■□□ 17.4
RPS3P23396 DHFR-206ENST00000513048 994 ntTSL 1 (best)9.28□□□□□ -0.923e-32■■■□□ 17.4
RPS3P23396 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.944e-8■■■□□ 17.4
RPS3P23396 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC8.54□□□□□ -1.043e-32■■■□□ 17.4
RPS3P23396 FST-204ENST00000497789 712 ntTSL 27.67□□□□□ -1.184e-8■■■□□ 17.4
RPS3P23396 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.232e-8■■■□□ 17.4
RPS3P23396 GLDC-222ENST00000640703 620 ntTSL 57.16□□□□□ -1.264e-8■■■□□ 17.4
RPS3P23396 FNDC3B-211ENST00000490832 772 ntTSL 47.16□□□□□ -1.264e-8■■■□□ 17.4
RPS3P23396 TSPAN3-209ENST00000560715 2892 ntTSL 26.36□□□□□ -1.392e-7■■■□□ 17.4
RPS3P23396 ACLY-206ENST00000588779 783 ntTSL 36.17□□□□□ -1.424e-8■■■□□ 17.4
Retrieved 100 of 24,271 protein–RNA pairs in 215 ms