RNA–Protein interactions for RNA: ENST00000538372.6

NDUFA12-202, Transcript of NADH:ubiquinone oxidoreductase subunit A12, humanhuman

TSL 2

Gene NDUFA12, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA12-202ENST00000538372 AEBP2Q6ZN18 517 aaPredicted RBP32.09■■■□□ 2.73
NDUFA12-202ENST00000538372 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
NDUFA12-202ENST00000538372 PHF23Q9BUL5 403 aaPredicted RBP27.72■■■□□ 2.03
NDUFA12-202ENST00000538372 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
NDUFA12-202ENST00000538372 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
NDUFA12-202ENST00000538372 FOXD1Q16676 465 aa25.24■■□□□ 1.63
NDUFA12-202ENST00000538372 ADRA2BP18089 450 aa24.42■■□□□ 1.5
NDUFA12-202ENST00000538372 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
NDUFA12-202ENST00000538372 PIAS4Q8N2W9 510 aaPredicted RBP23.86■■□□□ 1.41
NDUFA12-202ENST00000538372 MSH5O43196 834 aa23.23■■□□□ 1.31
NDUFA12-202ENST00000538372 PPP4R3CPQ6ZMV5 832 aa22.64■■□□□ 1.21
NDUFA12-202ENST00000538372 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
NDUFA12-202ENST00000538372 KCNA4P22459 653 aa22.29■■□□□ 1.16
NDUFA12-202ENST00000538372 MAPK8IP2Q13387 824 aaPredicted RBP22.11■■□□□ 1.13
NDUFA12-202ENST00000538372 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
NDUFA12-202ENST00000538372 CNKSR2Q8WXI2 1034 aa21.97■■□□□ 1.11
NDUFA12-202ENST00000538372 NPM3O75607 178 aaKnown RBP21.76■■□□□ 1.07
NDUFA12-202ENST00000538372 DMRT2Q9Y5R5 561 aa21.75■■□□□ 1.07
NDUFA12-202ENST00000538372 RNF216Q9NWF9 866 aaPredicted RBP21.5■■□□□ 1.03
NDUFA12-202ENST00000538372 HOXD11P31277 338 aaPredicted RBP21.36■■□□□ 1.01
NDUFA12-202ENST00000538372 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
NDUFA12-202ENST00000538372 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
NDUFA12-202ENST00000538372 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
NDUFA12-202ENST00000538372 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
NDUFA12-202ENST00000538372 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
NDUFA12-202ENST00000538372 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
NDUFA12-202ENST00000538372 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
NDUFA12-202ENST00000538372 ZBTB22O15209 634 aa20.49■□□□□ 0.87
NDUFA12-202ENST00000538372 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
NDUFA12-202ENST00000538372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■■□□□ 12.7
NDUFA12-202ENST00000538372 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
NDUFA12-202ENST00000538372 U3KPZ7 1027 aaPredicted RBP20.05■□□□□ 0.8
NDUFA12-202ENST00000538372 RNF39Q9H2S5 420 aa19.9■□□□□ 0.78
NDUFA12-202ENST00000538372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
NDUFA12-202ENST00000538372 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
NDUFA12-202ENST00000538372 SAMD1Q6SPF0 538 aaPredicted RBP19.8■□□□□ 0.76
NDUFA12-202ENST00000538372 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
NDUFA12-202ENST00000538372 C1QBPQ07021 282 aaKnown RBP19.69■□□□□ 0.74
NDUFA12-202ENST00000538372 APLP2Q06481 763 aa19.64■□□□□ 0.73
NDUFA12-202ENST00000538372 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
NDUFA12-202ENST00000538372 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
NDUFA12-202ENST00000538372 CAPN15O75808 1086 aa19.4■□□□□ 0.7
NDUFA12-202ENST00000538372 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
NDUFA12-202ENST00000538372 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
NDUFA12-202ENST00000538372 CACNB1Q02641 598 aaPredicted RBP19.31■□□□□ 0.68
NDUFA12-202ENST00000538372 POLA2Q14181 598 aa19.04■□□□□ 0.64
NDUFA12-202ENST00000538372 ABCB7O75027 752 aa19.02■□□□□ 0.64
NDUFA12-202ENST00000538372 DSG3P32926 999 aa19.01■□□□□ 0.63
NDUFA12-202ENST00000538372 FBLN2P98095 1184 aa18.76■□□□□ 0.59
NDUFA12-202ENST00000538372 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
NDUFA12-202ENST00000538372 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
NDUFA12-202ENST00000538372 FKBP8Q14318 412 aa18.57■□□□□ 0.56
NDUFA12-202ENST00000538372 SPDYE4A6NLX3 237 aa18.39■□□□□ 0.53
NDUFA12-202ENST00000538372 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
NDUFA12-202ENST00000538372 SPDYE2BA6NHP3 402 aa18.25■□□□□ 0.51
NDUFA12-202ENST00000538372 SPDYE6P0CI01 402 aa18.25■□□□□ 0.51
NDUFA12-202ENST00000538372 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
NDUFA12-202ENST00000538372 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
NDUFA12-202ENST00000538372 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
NDUFA12-202ENST00000538372 SSUH2Q9Y2M2 353 aa18.1■□□□□ 0.49
NDUFA12-202ENST00000538372 PROM2Q8N271 834 aa18.06■□□□□ 0.48
NDUFA12-202ENST00000538372 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
NDUFA12-202ENST00000538372 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
NDUFA12-202ENST00000538372 FBXO3Q9UK99 471 aa17.86■□□□□ 0.45
NDUFA12-202ENST00000538372 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
NDUFA12-202ENST00000538372 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
NDUFA12-202ENST00000538372 SPDYE1Q8NFV5 336 aaPredicted RBP17.68■□□□□ 0.42
NDUFA12-202ENST00000538372 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
NDUFA12-202ENST00000538372 VASPP50552 380 aaPredicted RBP17.59■□□□□ 0.41
NDUFA12-202ENST00000538372 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
NDUFA12-202ENST00000538372 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
NDUFA12-202ENST00000538372 MIER1Q8N108 512 aa17.44■□□□□ 0.38
NDUFA12-202ENST00000538372 PLCD3Q8N3E9 789 aa17.43■□□□□ 0.38
NDUFA12-202ENST00000538372 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
NDUFA12-202ENST00000538372 PLEKHG5O94827 1062 aa17.35■□□□□ 0.37
NDUFA12-202ENST00000538372 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
NDUFA12-202ENST00000538372 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
NDUFA12-202ENST00000538372 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
NDUFA12-202ENST00000538372 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
NDUFA12-202ENST00000538372 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
NDUFA12-202ENST00000538372 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.34
NDUFA12-202ENST00000538372 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
NDUFA12-202ENST00000538372 SPOCK2Q92563 424 aa17.15■□□□□ 0.34
NDUFA12-202ENST00000538372 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
NDUFA12-202ENST00000538372 PRKAR2AP13861 404 aaKnown RBP17.11■□□□□ 0.33
NDUFA12-202ENST00000538372 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
NDUFA12-202ENST00000538372 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
NDUFA12-202ENST00000538372 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
NDUFA12-202ENST00000538372 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
NDUFA12-202ENST00000538372 NUBP1P53384 320 aa16.95■□□□□ 0.3
NDUFA12-202ENST00000538372 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
NDUFA12-202ENST00000538372 PKD2Q13563 968 aa16.84■□□□□ 0.29
NDUFA12-202ENST00000538372 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
NDUFA12-202ENST00000538372 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
NDUFA12-202ENST00000538372 FAM212AQ96EL1 285 aa16.83■□□□□ 0.28
NDUFA12-202ENST00000538372 GSE1Q14687 1217 aa16.82■□□□□ 0.28
NDUFA12-202ENST00000538372 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
NDUFA12-202ENST00000538372 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
NDUFA12-202ENST00000538372 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
NDUFA12-202ENST00000538372 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms