RNA–Protein interactions for RNA: ENST00000640703.1

GLDC-222, Transcript of glycine decarboxylase, human

TSL 5

Gene GLDC, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GLDC-222	ENST00000640703	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.55	■□□□□ 0.88
GLDC-222	ENST00000640703	CHIC1	Q5VXU3	224 aa		19.84	■□□□□ 0.77
GLDC-222	ENST00000640703	SENP3	Q9H4L4	574 aa	Predicted RBP	17.56	■□□□□ 0.4
GLDC-222	ENST00000640703	PHF23	Q9BUL5	403 aa	Predicted RBP	17.37	■□□□□ 0.37
GLDC-222	ENST00000640703	FOXD1	Q16676	465 aa		16.28	■□□□□ 0.2
GLDC-222	ENST00000640703	PLPPR3	Q6T4P5	718 aa		16.02	■□□□□ 0.16
GLDC-222	ENST00000640703	PPP6R1	Q9UPN7	881 aa		15.42	■□□□□ 0.06
GLDC-222	ENST00000640703	ADRA2B	P18089	450 aa		15.41	■□□□□ 0.06
GLDC-222	ENST00000640703	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.33	■□□□□ 0.04
GLDC-222	ENST00000640703	MSH5	O43196	834 aa		15.19	■□□□□ 0.02
GLDC-222	ENST00000640703	POTED	Q86YR6	584 aa		14.28	□□□□□ -0.12
GLDC-222	ENST00000640703	SCAF1	Q9H7N4	1312 aa	Known RBP	14.18	□□□□□ -0.14
GLDC-222	ENST00000640703	PPP4R3CP	Q6ZMV5	832 aa		14.06	□□□□□ -0.16
GLDC-222	ENST00000640703	MAPK8IP2	Q13387	824 aa	Predicted RBP	14.05	□□□□□ -0.16
GLDC-222	ENST00000640703	DMRT2	Q9Y5R5	561 aa		13.95	□□□□□ -0.18
GLDC-222	ENST00000640703	CNKSR2	Q8WXI2	1034 aa		13.75	□□□□□ -0.21
GLDC-222	ENST00000640703	NCBP3	Q53F19	620 aa	Known RBP	13.66	□□□□□ -0.22
GLDC-222	ENST00000640703	HOXD11	P31277	338 aa	Predicted RBP	13.54	□□□□□ -0.24
GLDC-222	ENST00000640703	RNF216	Q9NWF9	866 aa	Predicted RBP	13.54	□□□□□ -0.24
GLDC-222	ENST00000640703	DCAF8L1	A6NGE4	600 aa		13.41	□□□□□ -0.26
GLDC-222	ENST00000640703	NPM3	O75607	178 aa	Known RBP	13.4	□□□□□ -0.26
GLDC-222	ENST00000640703	KCNA4	P22459	653 aa		13.39	□□□□□ -0.27
GLDC-222	ENST00000640703	NISCH	Q9Y2I1	1504 aa		13.26	□□□□□ -0.29
GLDC-222	ENST00000640703	DNAJC5B	Q9UF47	199 aa		13.04	□□□□□ -0.32
GLDC-222	ENST00000640703	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.95	□□□□□ -0.34
GLDC-222	ENST00000640703	RNF39	Q9H2S5	420 aa		12.95	□□□□□ -0.34
GLDC-222	ENST00000640703	CACNB1	Q02641	598 aa	Predicted RBP	12.85	□□□□□ -0.35
GLDC-222	ENST00000640703	C1QBP	Q07021	282 aa	Known RBP	12.81	□□□□□ -0.36
GLDC-222	ENST00000640703	ABCC9	O60706	1549 aa		12.8	□□□□□ -0.36
GLDC-222	ENST00000640703	PELP1	Q8IZL8	1130 aa	Known RBP	12.75	□□□□□ -0.37
GLDC-222	ENST00000640703	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.73	□□□□□ -0.37
GLDC-222	ENST00000640703	SLC4A2	P04920	1241 aa		12.69	□□□□□ -0.38
GLDC-222	ENST00000640703		U3KPZ7	1027 aa	Predicted RBP	12.65	□□□□□ -0.38
GLDC-222	ENST00000640703	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.49	□□□□□ -0.41
GLDC-222	ENST00000640703	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.49	□□□□□ -0.41
GLDC-222	ENST00000640703	MYT1	Q01538	1121 aa		12.48	□□□□□ -0.41
GLDC-222	ENST00000640703	HRC	P23327	699 aa		12.44	□□□□□ -0.42
GLDC-222	ENST00000640703	FOXD4L1	Q9NU39	408 aa		12.44	□□□□□ -0.42
GLDC-222	ENST00000640703	APLP2	Q06481	763 aa		12.43	□□□□□ -0.42
GLDC-222	ENST00000640703	MYCN	P04198	464 aa	Predicted RBP	12.42	□□□□□ -0.42
GLDC-222	ENST00000640703	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.41	□□□□□ -0.42
GLDC-222	ENST00000640703	CAPN15	O75808	1086 aa		12.4	□□□□□ -0.42
GLDC-222	ENST00000640703	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.39	□□□□□ -0.43
GLDC-222	ENST00000640703	ZBTB22	O15209	634 aa		12.28	□□□□□ -0.44
GLDC-222	ENST00000640703	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.28	□□□□□ -0.44
GLDC-222	ENST00000640703	TRH	P20396	242 aa	Predicted RBP	12.27	□□□□□ -0.45
GLDC-222	ENST00000640703	DSG3	P32926	999 aa		12.22	□□□□□ -0.45
GLDC-222	ENST00000640703	CCDC180	Q9P1Z9	1646 aa		12.19	□□□□□ -0.46
GLDC-222	ENST00000640703	ABCB7	O75027	752 aa		12.11	□□□□□ -0.47
GLDC-222	ENST00000640703	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.05	□□□□□ -0.48
GLDC-222	ENST00000640703	ATXN8OS	P0DMR3	200 aa		12.04	□□□□□ -0.48
GLDC-222	ENST00000640703	EHMT2	Q96KQ7	1210 aa		12.04	□□□□□ -0.48
GLDC-222	ENST00000640703	DNAJC5	Q9H3Z4	198 aa		12.03	□□□□□ -0.48
GLDC-222	ENST00000640703	CSRNP3	Q8WYN3	585 aa		12	□□□□□ -0.49
GLDC-222	ENST00000640703	POLA2	Q14181	598 aa		11.99	□□□□□ -0.49
GLDC-222	ENST00000640703	DCAF1	Q9Y4B6	1507 aa		11.95	□□□□□ -0.5
GLDC-222	ENST00000640703	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.9	□□□□□ -0.5
GLDC-222	ENST00000640703	RB1CC1	Q8TDY2	1594 aa		11.88	□□□□□ -0.51
GLDC-222	ENST00000640703	ZEB1	P37275	1124 aa	Predicted RBP	11.82	□□□□□ -0.52
GLDC-222	ENST00000640703	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.82	□□□□□ -0.52
GLDC-222	ENST00000640703	MYO15B	Q96JP2	1530 aa		11.81	□□□□□ -0.52
GLDC-222	ENST00000640703	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
GLDC-222	ENST00000640703	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.76	□□□□□ -0.53
GLDC-222	ENST00000640703	PCGF6	Q9BYE7	350 aa		11.76	□□□□□ -0.53
GLDC-222	ENST00000640703	RBM42	Q9BTD8	480 aa	Known RBP	11.71	□□□□□ -0.53
GLDC-222	ENST00000640703	UNC13A	Q9UPW8	1703 aa		11.67	□□□□□ -0.54
GLDC-222	ENST00000640703	BICRA	Q9NZM4	1560 aa		11.67	□□□□□ -0.54
GLDC-222	ENST00000640703	FBLN2	P98095	1184 aa		11.65	□□□□□ -0.54
GLDC-222	ENST00000640703	NACAD	O15069	1562 aa		11.65	□□□□□ -0.54
GLDC-222	ENST00000640703	TRIM26	Q12899	539 aa	Predicted RBP	11.61	□□□□□ -0.55
GLDC-222	ENST00000640703	CECR2	Q9BXF3	1484 aa		11.59	□□□□□ -0.55
GLDC-222	ENST00000640703	OSCAR	Q8IYS5	282 aa		11.59	□□□□□ -0.55
GLDC-222	ENST00000640703	CC2D2A	Q9P2K1	1620 aa		11.55	□□□□□ -0.56
GLDC-222	ENST00000640703	ACIN1	Q9UKV3	1341 aa	Known RBP	11.53	□□□□□ -0.56
GLDC-222	ENST00000640703	MKRN4P	Q13434	485 aa	Predicted RBP	11.51	□□□□□ -0.57
GLDC-222	ENST00000640703	AKT1S1	Q96B36	256 aa		11.48	□□□□□ -0.57
GLDC-222	ENST00000640703	SPDYE2B	A6NHP3	402 aa		11.45	□□□□□ -0.58
GLDC-222	ENST00000640703	SPDYE6	P0CI01	402 aa		11.45	□□□□□ -0.58
GLDC-222	ENST00000640703	SPDYE2	Q495Y8	402 aa		11.45	□□□□□ -0.58
GLDC-222	ENST00000640703	CENPB	P07199	599 aa	Predicted RBP	11.43	□□□□□ -0.58
GLDC-222	ENST00000640703	SUPT5H	O00267	1087 aa	Known RBP	11.42	□□□□□ -0.58
GLDC-222	ENST00000640703	SHROOM4	Q9ULL8	1493 aa		11.38	□□□□□ -0.59
GLDC-222	ENST00000640703	EIF4G1	Q04637	1599 aa	Known RBP	11.37	□□□□□ -0.59
GLDC-222	ENST00000640703	ZNF692	Q9BU19	519 aa	Predicted RBP	11.37	□□□□□ -0.59
GLDC-222	ENST00000640703	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.37	□□□□□ -0.59
GLDC-222	ENST00000640703	REM2	Q8IYK8	340 aa	Predicted RBP	11.35	□□□□□ -0.59
GLDC-222	ENST00000640703	NEUROD1	Q13562	356 aa		11.32	□□□□□ -0.6
GLDC-222	ENST00000640703	CHRDL2	Q6WN34	429 aa		11.31	□□□□□ -0.6
GLDC-222	ENST00000640703	CUX2	O14529	1486 aa		11.31	□□□□□ -0.6
GLDC-222	ENST00000640703	SSUH2	Q9Y2M2	353 aa		11.3	□□□□□ -0.6
GLDC-222	ENST00000640703	GTF3C3	Q9Y5Q9	886 aa		11.29	□□□□□ -0.6
GLDC-222	ENST00000640703	DCAF8L2	P0C7V8	631 aa		11.28	□□□□□ -0.6
GLDC-222	ENST00000640703	POTEH	Q6S545	545 aa		11.28	□□□□□ -0.6
GLDC-222	ENST00000640703	CLSPN	Q9HAW4	1339 aa		11.25	□□□□□ -0.61
GLDC-222	ENST00000640703	PITPNM1	O00562	1244 aa		11.22	□□□□□ -0.61
GLDC-222	ENST00000640703	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.19	□□□□□ -0.62
GLDC-222	ENST00000640703	SPDYE4	A6NLX3	237 aa		11.17	□□□□□ -0.62
GLDC-222	ENST00000640703	TRIM41	Q8WV44	630 aa		11.16	□□□□□ -0.62
GLDC-222	ENST00000640703	CLEC11A	Q9Y240	323 aa		11.16	□□□□□ -0.62
GLDC-222	ENST00000640703	BCL11A	Q9H165	835 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms