Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH1P12830 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH1P12830 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH1P12830 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 AL049597.2-201ENST00000565575 961 ntBASIC17.56■□□□□ 0.4
CDH1P12830 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CDH1P12830 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.56■□□□□ 0.4
CDH1P12830 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.56■□□□□ 0.4
CDH1P12830 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH1P12830 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH1P12830 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH1P12830 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH1P12830 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH1P12830 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH1P12830 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CDH1P12830 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH1P12830 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
CDH1P12830 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 HLA-F-220ENST00000434407 884 ntBASIC17.55■□□□□ 0.4
CDH1P12830 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.55■□□□□ 0.4
CDH1P12830 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH1P12830 LINC01238-205ENST00000567549 1107 ntBASIC17.55■□□□□ 0.4
CDH1P12830 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH1P12830 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH1P12830 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CDH1P12830 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 AC139713.2-201ENST00000641328 2723 ntBASIC17.55■□□□□ 0.4
CDH1P12830 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH1P12830 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDH1P12830 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDH1P12830 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH1P12830 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH1P12830 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 HBZP1-201ENST00000354915 429 ntBASIC17.54■□□□□ 0.4
CDH1P12830 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 HYMAI.1-201ENST00000620949 238 ntBASIC17.54■□□□□ 0.4
CDH1P12830 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
CDH1P12830 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms