Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC084018.2-201ENST00000613093 2607 ntBASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 KRT8P47-201ENST00000604727 1398 ntBASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 CYP2D8P-201ENST00000433633 1490 ntBASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV5-3A0A0A0MS03 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 DDX43P3-201ENST00000441064 443 ntBASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 FAM87A-204ENST00000613235 858 ntBASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC010947.1-201ENST00000623454 693 ntBASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC092865.7-201ENST00000641832 219 ntBASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 KRT8P9-201ENST00000558927 1449 ntBASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRBV5-3A0A0A0MS03 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC124067.4-201ENST00000519691 2379 ntBASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 MIR718-201ENST00000390190 70 ntBASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 AL157888.1-201ENST00000631930 593 ntBASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC011676.5-201ENST00000624864 2660 ntBASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 AC106820.2-201ENST00000563775 3264 ntBASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV5-3A0A0A0MS03 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV5-3A0A0A0MS03 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV5-3A0A0A0MS03 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV5-3A0A0A0MS03 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms