Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 MYCNOS-205ENST00000641950 531 ntBASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VCX3AQ9NNX9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VCX3AQ9NNX9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 MIR939-201ENST00000401314 82 ntBASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 RARRES2P4-201ENST00000514074 484 ntBASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 UBE2DNL-204ENST00000602536 740 ntBASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 AC022188.1-201ENST00000620960 1664 ntBASIC16.85■□□□□ 0.29
VCX3AQ9NNX9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3AQ9NNX9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms