Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 AC079781.3-201ENST00000449110 356 ntBASIC25.07■■□□□ 1.6
TMC1Q8TDI8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 AL031008.1-201ENST00000619963 541 ntBASIC25.07■■□□□ 1.6
TMC1Q8TDI8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
TMC1Q8TDI8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 AC068472.1-201ENST00000474589 881 ntBASIC25.06■■□□□ 1.6
TMC1Q8TDI8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMC1Q8TDI8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 AL353801.3-201ENST00000609898 542 ntBASIC25.05■■□□□ 1.6
TMC1Q8TDI8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC25.05■■□□□ 1.6
TMC1Q8TDI8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 FDX1P1-201ENST00000449115 551 ntBASIC25.04■■□□□ 1.6
TMC1Q8TDI8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 BNIP3P18-201ENST00000593976 575 ntBASIC25.04■■□□□ 1.6
TMC1Q8TDI8 ANKRD20A8P-203ENST00000641373 517 ntBASIC25.04■■□□□ 1.6
TMC1Q8TDI8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMC1Q8TDI8 KRT8P10-201ENST00000450021 1447 ntBASIC25.03■■□□□ 1.6
TMC1Q8TDI8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 KRT16P4-201ENST00000453883 522 ntBASIC25.03■■□□□ 1.6
TMC1Q8TDI8 AC009078.2-202ENST00000463353 338 ntBASIC25.03■■□□□ 1.6
TMC1Q8TDI8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMC1Q8TDI8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms