Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 AC026471.1-201ENST00000564629 3026 ntBASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.42■□□□□ 0.38
KRT78Q8N1N4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT78Q8N1N4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 KRT18P38-201ENST00000449496 1282 ntBASIC17.41■□□□□ 0.38
KRT78Q8N1N4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 AC092597.1-201ENST00000487352 616 ntBASIC17.41■□□□□ 0.38
KRT78Q8N1N4 DUX4L26-201ENST00000489078 1255 ntBASIC17.41■□□□□ 0.38
KRT78Q8N1N4 AC022616.7-201ENST00000525383 220 ntBASIC17.41■□□□□ 0.38
KRT78Q8N1N4 ZNF444P1-201ENST00000559497 298 ntBASIC17.41■□□□□ 0.38
KRT78Q8N1N4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT78Q8N1N4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 HBZP1-201ENST00000354915 429 ntBASIC17.4■□□□□ 0.38
KRT78Q8N1N4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 KRT18P21-201ENST00000515767 1272 ntBASIC17.4■□□□□ 0.38
KRT78Q8N1N4 DUTP2-201ENST00000519164 463 ntBASIC17.4■□□□□ 0.38
KRT78Q8N1N4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT78Q8N1N4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms