Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
LCA10Q71F78 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.75□□□□□ -0.85
LCA10Q71F78 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.75□□□□□ -0.85
LCA10Q71F78 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
LCA10Q71F78 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 CASK-202ENST00000378158 3848 ntTSL 5 BASIC9.75□□□□□ -0.85
LCA10Q71F78 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC9.75□□□□□ -0.85
LCA10Q71F78 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
LCA10Q71F78 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
LCA10Q71F78 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LCA10Q71F78 AL121761.2-201ENST00000598007 1648 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LCA10Q71F78 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LCA10Q71F78 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 HLA-G-202ENST00000376815 851 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 HLA-G-203ENST00000376818 1127 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.74□□□□□ -0.85
LCA10Q71F78 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 AC105020.6-201ENST00000621523 1217 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 LYSMD4-203ENST00000378904 2122 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 PHGDH-210ENST00000641115 1638 ntBASIC9.74□□□□□ -0.85
LCA10Q71F78 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LCA10Q71F78 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC9.74□□□□□ -0.85
LCA10Q71F78 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
LCA10Q71F78 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
LCA10Q71F78 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
LCA10Q71F78 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms