Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 AC005052.1-201ENST00000625181 2492 ntBASIC13.08□□□□□ -0.31
LINC00173Q6ZV60 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00173Q6ZV60 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00173Q6ZV60 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 AC093787.1-201ENST00000450396 207 ntBASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 AC011767.1-201ENST00000617410 1153 ntBASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00173Q6ZV60 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 PAUPAR-201ENST00000630360 2965 ntBASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.07□□□□□ -0.32
LINC00173Q6ZV60 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms