Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 LINC01311-201ENST00000565162 1445 ntBASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 AC009102.3-201ENST00000623118 1491 ntBASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RASGEF1BQ0VAM2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RASGEF1BQ0VAM2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
RASGEF1BQ0VAM2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 AC099343.3-201ENST00000605834 2503 ntBASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PVRIG2P-201ENST00000435460 978 ntBASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 AC092597.1-201ENST00000487352 616 ntBASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 AL136038.4-201ENST00000603606 1261 ntBASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RASGEF1BQ0VAM2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 HBZP1-201ENST00000354915 429 ntBASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RASGEF1BQ0VAM2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms