Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
UBE2AP49459 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2AP49459 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 AC005332.8-201ENST00000622750 2735 ntBASIC11.47□□□□□ -0.57
UBE2AP49459 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2AP49459 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2AP49459 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2AP49459 AL354751.1-201ENST00000412768 1863 ntBASIC11.46□□□□□ -0.57
UBE2AP49459 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
UBE2AP49459 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 AL365209.1-201ENST00000624418 6473 ntBASIC11.46□□□□□ -0.57
UBE2AP49459 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2AP49459 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2AP49459 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2AP49459 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.46□□□□□ -0.57
UBE2AP49459 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2AP49459 AP005242.2-201ENST00000580065 1175 ntBASIC11.46□□□□□ -0.57
UBE2AP49459 Z99916.2-201ENST00000604037 246 ntBASIC11.46□□□□□ -0.57
UBE2AP49459 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2AP49459 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2AP49459 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
UBE2AP49459 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2AP49459 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2AP49459 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
UBE2AP49459 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2AP49459 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC11.46□□□□□ -0.58
UBE2AP49459 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2AP49459 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.46□□□□□ -0.58
UBE2AP49459 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.46□□□□□ -0.58
UBE2AP49459 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2AP49459 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
UBE2AP49459 GPAT2P1-201ENST00000444924 1672 ntBASIC11.46□□□□□ -0.58
UBE2AP49459 AL162741.1-201ENST00000565563 1558 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
UBE2AP49459 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2AP49459 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 ABALON-201ENST00000629058 1903 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2AP49459 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2AP49459 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2AP49459 MIR564-202ENST00000385049 94 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 TSPY7P-201ENST00000431358 1114 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 TSPY17P-201ENST00000450329 467 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC009065.1-201ENST00000564055 1225 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.45□□□□□ -0.58
UBE2AP49459 AC008622.2-201ENST00000617006 1229 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 AC116562.4-202ENST00000641738 218 ntBASIC11.45□□□□□ -0.58
UBE2AP49459 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UBE2AP49459 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms