Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CPNE6O95741 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE6O95741 AC246785.2-201ENST00000432512 513 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 KRT17P6-201ENST00000453795 1220 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 FOSL1P1-201ENST00000511041 816 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 AC074051.2-201ENST00000565115 352 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.7■□□□□ 0.42
CPNE6O95741 AL732292.2-201ENST00000609649 430 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.7■□□□□ 0.42
CPNE6O95741 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 MTMR9LP-203ENST00000426597 1545 ntBASIC17.7■□□□□ 0.42
CPNE6O95741 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.7■□□□□ 0.42
CPNE6O95741 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.7■□□□□ 0.42
CPNE6O95741 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPNE6O95741 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CPNE6O95741 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
CPNE6O95741 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CPNE6O95741 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPNE6O95741 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPNE6O95741 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 AC233702.3-201ENST00000578656 1387 ntBASIC17.69■□□□□ 0.42
CPNE6O95741 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPNE6O95741 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE6O95741 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE6O95741 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE6O95741 AL592071.1-201ENST00000611956 408 ntBASIC17.69■□□□□ 0.42
CPNE6O95741 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CPNE6O95741 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE6O95741 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPNE6O95741 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE6O95741 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 AL353692.3-201ENST00000407031 1396 ntBASIC17.68■□□□□ 0.42
CPNE6O95741 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CPNE6O95741 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 VENTXP7-201ENST00000475503 772 ntBASIC17.68■□□□□ 0.42
CPNE6O95741 KRT18P31-201ENST00000506277 1292 ntBASIC17.68■□□□□ 0.42
CPNE6O95741 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE6O95741 AC124864.1-201ENST00000623408 392 ntBASIC17.68■□□□□ 0.42
CPNE6O95741 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 ABALON-201ENST00000629058 1903 ntBASIC17.68■□□□□ 0.42
CPNE6O95741 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE6O95741 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE6O95741 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE6O95741 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE6O95741 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CPNE6O95741 AL163051.1-201ENST00000569214 1512 ntBASIC17.67■□□□□ 0.42
CPNE6O95741 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE6O95741 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE6O95741 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 LINC00167-201ENST00000530583 1419 ntBASIC17.67■□□□□ 0.42
CPNE6O95741 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPNE6O95741 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE6O95741 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms