Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMAD9O15198 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMAD9O15198 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SMAD9O15198 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD9O15198 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD9O15198 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SMAD9O15198 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.39■□□□□ 0.21
SMAD9O15198 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SMAD9O15198 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SMAD9O15198 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SMAD9O15198 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 AL031133.1-201ENST00000406807 723 ntBASIC16.39■□□□□ 0.21
SMAD9O15198 HLA-F-220ENST00000434407 884 ntBASIC16.39■□□□□ 0.21
SMAD9O15198 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD9O15198 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD9O15198 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.39■□□□□ 0.21
SMAD9O15198 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD9O15198 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD9O15198 AC087388.1-201ENST00000571370 1112 ntBASIC16.39■□□□□ 0.21
SMAD9O15198 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD9O15198 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SMAD9O15198 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.39■□□□□ 0.21
SMAD9O15198 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.39■□□□□ 0.21
SMAD9O15198 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMAD9O15198 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD9O15198 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 SPDYE13P-201ENST00000445314 798 ntBASIC16.38■□□□□ 0.21
SMAD9O15198 VENTXP5-201ENST00000523979 775 ntBASIC16.38■□□□□ 0.21
SMAD9O15198 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
SMAD9O15198 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMAD9O15198 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.38■□□□□ 0.21
SMAD9O15198 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD9O15198 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMAD9O15198 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMAD9O15198 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMAD9O15198 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.37■□□□□ 0.21
SMAD9O15198 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.37■□□□□ 0.21
SMAD9O15198 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SMAD9O15198 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMAD9O15198 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms