Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 AL024508.2-201ENST00000607749 1894 ntBASIC18.13■□□□□ 0.49
NDNQ99608 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NDNQ99608 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NDNQ99608 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDNQ99608 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDNQ99608 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
NDNQ99608 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 HMGA1P5-201ENST00000412453 271 ntBASIC18.12■□□□□ 0.49
NDNQ99608 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NDNQ99608 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDNQ99608 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.12■□□□□ 0.49
NDNQ99608 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NDNQ99608 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDNQ99608 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.11■□□□□ 0.49
NDNQ99608 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.11■□□□□ 0.49
NDNQ99608 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.11■□□□□ 0.49
NDNQ99608 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.11■□□□□ 0.49
NDNQ99608 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDNQ99608 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.11■□□□□ 0.49
NDNQ99608 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 PCDHA12-202ENST00000613593 2588 ntBASIC18.11■□□□□ 0.49
NDNQ99608 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
NDNQ99608 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDNQ99608 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NDNQ99608 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NDNQ99608 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDNQ99608 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDNQ99608 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms