Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.02■□□□□ 0.32
NR1H4Q96RI1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 KRT18P5-201ENST00000436075 1291 ntBASIC17.02■□□□□ 0.32
NR1H4Q96RI1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NR1H4Q96RI1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NR1H4Q96RI1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NR1H4Q96RI1 AC133963.1-201ENST00000504166 1679 ntBASIC17.01■□□□□ 0.31
NR1H4Q96RI1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
NR1H4Q96RI1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NR1H4Q96RI1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17■□□□□ 0.31
NR1H4Q96RI1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17■□□□□ 0.31
NR1H4Q96RI1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17■□□□□ 0.31
NR1H4Q96RI1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17■□□□□ 0.31
NR1H4Q96RI1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17■□□□□ 0.31
NR1H4Q96RI1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms