Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 HLA-L-209ENST00000420110 1011 ntBASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 MCCD1P1-208ENST00000445732 328 ntBASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 DUTP2-201ENST00000519164 463 ntBASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.94■□□□□ 0.46
CKAP2Q8WWK9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 AC100803.2-201ENST00000562459 1963 ntBASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 KRT16P5-201ENST00000455284 522 ntBASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 HLA-J-201ENST00000462773 1622 ntBASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CKAP2Q8WWK9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CKAP2Q8WWK9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms