Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 HYMAI.1-201ENST00000620949 238 ntBASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 KRT18P55-202ENST00000578578 1546 ntBASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TMEM35BQ8NCS4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35BQ8NCS4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35BQ8NCS4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35BQ8NCS4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TMEM35BQ8NCS4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 MIR662-201ENST00000384847 95 ntBASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 ZNF444P1-201ENST00000559497 298 ntBASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 AC022898.2-201ENST00000616822 1312 ntBASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 LINC01311-201ENST00000565162 1445 ntBASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM35BQ8NCS4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 KRT18P21-201ENST00000515767 1272 ntBASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM35BQ8NCS4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM35BQ8NCS4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms