Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CSMD3Q7Z407 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 SNHG9-202ENST00000564014 471 ntBASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AC011467.4-201ENST00000594891 528 ntBASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AC018845.2-201ENST00000568326 409 ntBASIC12.49□□□□□ -0.41
CSMD3Q7Z407 AL390955.2-201ENST00000603032 514 ntBASIC12.49□□□□□ -0.41
CSMD3Q7Z407 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CSMD3Q7Z407 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 IGLL3P-201ENST00000412472 434 ntBASIC12.48□□□□□ -0.41
CSMD3Q7Z407 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 LINC01126-201ENST00000623515 1646 ntBASIC12.48□□□□□ -0.41
CSMD3Q7Z407 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 AJ011932.1-201ENST00000621707 465 ntBASIC12.48□□□□□ -0.41
CSMD3Q7Z407 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 PRSS29P-201ENST00000440800 595 ntBASIC12.48□□□□□ -0.41
CSMD3Q7Z407 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CSMD3Q7Z407 AC005593.1-201ENST00000624894 515 ntBASIC12.48□□□□□ -0.41
CSMD3Q7Z407 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 AC009102.3-201ENST00000623118 1491 ntBASIC12.47□□□□□ -0.41
CSMD3Q7Z407 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CSMD3Q7Z407 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms