Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-BQ31612 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.47■□□□□ 0.39
HLA-BQ31612 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-BQ31612 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.47■□□□□ 0.39
HLA-BQ31612 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.47■□□□□ 0.39
HLA-BQ31612 PGM5P2-202ENST00000637225 1043 ntBASIC17.47■□□□□ 0.39
HLA-BQ31612 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.47■□□□□ 0.39
HLA-BQ31612 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HLA-BQ31612 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-BQ31612 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HLA-BQ31612 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.46■□□□□ 0.39
HLA-BQ31612 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-BQ31612 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HLA-BQ31612 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 AC006557.2-201ENST00000592985 1240 ntBASIC17.46■□□□□ 0.39
HLA-BQ31612 AC004817.3-201ENST00000602957 2129 ntBASIC17.46■□□□□ 0.39
HLA-BQ31612 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.46■□□□□ 0.39
HLA-BQ31612 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
HLA-BQ31612 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HLA-BQ31612 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.46■□□□□ 0.39
HLA-BQ31612 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HLA-BQ31612 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-BQ31612 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HLA-BQ31612 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.46■□□□□ 0.38
HLA-BQ31612 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 GMCL1P1-201ENST00000463439 1581 ntBASIC17.45■□□□□ 0.38
HLA-BQ31612 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-BQ31612 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.45■□□□□ 0.38
HLA-BQ31612 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-BQ31612 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HLA-BQ31612 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.45■□□□□ 0.38
HLA-BQ31612 KRT18P27-201ENST00000427733 1299 ntBASIC17.45■□□□□ 0.38
HLA-BQ31612 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.45■□□□□ 0.38
HLA-BQ31612 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 AC064836.3-201ENST00000607928 673 ntBASIC17.45■□□□□ 0.38
HLA-BQ31612 AC073592.4-201ENST00000623827 446 ntBASIC17.45■□□□□ 0.38
HLA-BQ31612 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-BQ31612 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-BQ31612 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-BQ31612 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-BQ31612 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-BQ31612 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-BQ31612 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-BQ31612 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-BQ31612 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-BQ31612 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-BQ31612 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms