Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CX3CR1P49238 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 HMGA1P5-201ENST00000412453 271 ntBASIC15.9■□□□□ 0.14
CX3CR1P49238 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 AC093827.2-201ENST00000512654 315 ntBASIC15.9■□□□□ 0.14
CX3CR1P49238 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CX3CR1P49238 AL024508.2-201ENST00000607749 1894 ntBASIC15.9■□□□□ 0.14
CX3CR1P49238 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CX3CR1P49238 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.9■□□□□ 0.14
CX3CR1P49238 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CX3CR1P49238 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CX3CR1P49238 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
CX3CR1P49238 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
CX3CR1P49238 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 SEC1P-202ENST00000473944 940 ntBASIC15.89■□□□□ 0.13
CX3CR1P49238 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.89■□□□□ 0.13
CX3CR1P49238 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.89■□□□□ 0.13
CX3CR1P49238 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CX3CR1P49238 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.89■□□□□ 0.13
CX3CR1P49238 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CX3CR1P49238 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.88■□□□□ 0.13
CX3CR1P49238 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CX3CR1P49238 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CX3CR1P49238 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.88■□□□□ 0.13
CX3CR1P49238 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CX3CR1P49238 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.88■□□□□ 0.13
CX3CR1P49238 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.88■□□□□ 0.13
CX3CR1P49238 AL596275.1-201ENST00000423464 877 ntBASIC15.88■□□□□ 0.13
CX3CR1P49238 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.88■□□□□ 0.13
CX3CR1P49238 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.88■□□□□ 0.13
CX3CR1P49238 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CX3CR1P49238 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.88■□□□□ 0.13
CX3CR1P49238 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.88■□□□□ 0.13
CX3CR1P49238 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CX3CR1P49238 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms