Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.24■□□□□ 0.03
COL8A2P25067 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.24■□□□□ 0.03
COL8A2P25067 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 LETM1P2-201ENST00000597330 2178 ntBASIC15.24■□□□□ 0.03
COL8A2P25067 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.24■□□□□ 0.03
COL8A2P25067 AC246785.2-201ENST00000432512 513 ntBASIC15.24■□□□□ 0.03
COL8A2P25067 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.24■□□□□ 0.03
COL8A2P25067 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.24■□□□□ 0.03
COL8A2P25067 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.24■□□□□ 0.03
COL8A2P25067 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
COL8A2P25067 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.24■□□□□ 0.03
COL8A2P25067 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
COL8A2P25067 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
COL8A2P25067 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 AC004870.1-201ENST00000315132 882 ntBASIC15.23■□□□□ 0.03
COL8A2P25067 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.23■□□□□ 0.03
COL8A2P25067 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
COL8A2P25067 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.23■□□□□ 0.03
COL8A2P25067 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.23■□□□□ 0.03
COL8A2P25067 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 AL353801.3-201ENST00000609898 542 ntBASIC15.23■□□□□ 0.03
COL8A2P25067 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
COL8A2P25067 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
COL8A2P25067 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.23■□□□□ 0.03
COL8A2P25067 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 ESPNP-201ENST00000270691 2015 ntBASIC15.22■□□□□ 0.03
COL8A2P25067 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
COL8A2P25067 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.22■□□□□ 0.03
COL8A2P25067 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.22■□□□□ 0.03
COL8A2P25067 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.22■□□□□ 0.03
COL8A2P25067 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.22■□□□□ 0.03
COL8A2P25067 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.22■□□□□ 0.03
COL8A2P25067 LINC01711-201ENST00000598340 967 ntBASIC15.22■□□□□ 0.03
COL8A2P25067 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.22■□□□□ 0.03
COL8A2P25067 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL8A2P25067 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms