Protein–RNA interactions for Protein: Q9UHD1

CHORDC1, Cysteine and histidine-rich domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1Q9UHD1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 AC116407.4-201ENST00000623319 1061 ntBASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHORDC1Q9UHD1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 AP000593.1-201ENST00000393668 712 ntBASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHORDC1Q9UHD1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 AL391807.1-203ENST00000604392 2365 ntBASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHORDC1Q9UHD1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 AP000997.3-201ENST00000623333 2250 ntBASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHORDC1Q9UHD1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms