Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL19Q99731 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL19Q99731 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCL19Q99731 UPF3AP3-201ENST00000420996 769 ntBASIC15.24■□□□□ 0.03
CCL19Q99731 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL19Q99731 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL19Q99731 RNA5SP416-201ENST00000516838 111 ntBASIC15.24■□□□□ 0.03
CCL19Q99731 AC105339.3-201ENST00000560043 636 ntBASIC15.24■□□□□ 0.03
CCL19Q99731 AC012640.2-201ENST00000561606 901 ntBASIC15.24■□□□□ 0.03
CCL19Q99731 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL19Q99731 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL19Q99731 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CCL19Q99731 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL19Q99731 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL19Q99731 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL19Q99731 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.23■□□□□ 0.03
CCL19Q99731 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL19Q99731 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.23■□□□□ 0.03
CCL19Q99731 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL19Q99731 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL19Q99731 DNAJB3-201ENST00000446806 729 ntBASIC15.23■□□□□ 0.03
CCL19Q99731 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL19Q99731 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
CCL19Q99731 AC040169.1-201ENST00000565382 521 ntBASIC15.23■□□□□ 0.03
CCL19Q99731 NKAPP1-205ENST00000585790 367 ntBASIC15.23■□□□□ 0.03
CCL19Q99731 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 AC079781.4-201ENST00000641908 219 ntBASIC15.23■□□□□ 0.03
CCL19Q99731 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 LINC01126-201ENST00000623515 1646 ntBASIC15.23■□□□□ 0.03
CCL19Q99731 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCL19Q99731 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL19Q99731 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL19Q99731 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL19Q99731 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCL19Q99731 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL19Q99731 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL19Q99731 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL19Q99731 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL19Q99731 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL19Q99731 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL19Q99731 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms