Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.04■□□□□ -0
GAFA1Q96PS6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.04■□□□□ -0
GAFA1Q96PS6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.04■□□□□ -0
GAFA1Q96PS6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.04■□□□□ -0
GAFA1Q96PS6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 AL358472.4-201ENST00000633140 710 ntBASIC15.04■□□□□ -0
GAFA1Q96PS6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 NOC2LP1-202ENST00000452600 2235 ntBASIC15.04■□□□□ -0
GAFA1Q96PS6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.03■□□□□ -0
GAFA1Q96PS6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 AC007613.1-201ENST00000572811 2597 ntBASIC15.03■□□□□ -0
GAFA1Q96PS6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AC138932.1-201ENST00000534164 6830 ntBASIC15.03■□□□□ -0
GAFA1Q96PS6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AC009154.2-201ENST00000621177 724 ntBASIC15.03■□□□□ -0
GAFA1Q96PS6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AP000550.4-202ENST00000639755 178 ntBASIC15.03■□□□□ -0
GAFA1Q96PS6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.03■□□□□ -0
GAFA1Q96PS6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.03■□□□□ -0
GAFA1Q96PS6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.03■□□□□ -0
GAFA1Q96PS6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GAFA1Q96PS6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 BCL2-203ENST00000589955 5011 ntBASIC15.02■□□□□ -0
GAFA1Q96PS6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.02■□□□□ -0
GAFA1Q96PS6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.02■□□□□ -0
GAFA1Q96PS6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GAFA1Q96PS6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms