Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 AC079602.3-201ENST00000623931 403 ntBASIC18.64■□□□□ 0.57
HDAC11Q96DB2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HDAC11Q96DB2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 RNF152P1-201ENST00000397754 604 ntBASIC18.63■□□□□ 0.57
HDAC11Q96DB2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 AL136038.4-201ENST00000603606 1261 ntBASIC18.63■□□□□ 0.57
HDAC11Q96DB2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HDAC11Q96DB2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 RCN1P1-201ENST00000400413 996 ntBASIC18.62■□□□□ 0.57
HDAC11Q96DB2 TSPY5P-201ENST00000426936 936 ntBASIC18.62■□□□□ 0.57
HDAC11Q96DB2 HOMER2P1-201ENST00000455653 964 ntBASIC18.62■□□□□ 0.57
HDAC11Q96DB2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 AL391807.1-203ENST00000604392 2365 ntBASIC18.62■□□□□ 0.57
HDAC11Q96DB2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HDAC11Q96DB2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 NOC2LP2-201ENST00000407594 1944 ntBASIC18.61■□□□□ 0.57
HDAC11Q96DB2 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 KRT89P-201ENST00000620027 1478 ntBASIC18.61■□□□□ 0.57
HDAC11Q96DB2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 AK4P3-201ENST00000418260 669 ntBASIC18.61■□□□□ 0.57
HDAC11Q96DB2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC11Q96DB2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms