Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
SNRPEP62304 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.9□□□□□ -0.18
SNRPEP62304 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SNRPEP62304 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNRPEP62304 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SNRPEP62304 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNRPEP62304 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.9□□□□□ -0.19
SNRPEP62304 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SNRPEP62304 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
SNRPEP62304 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SNRPEP62304 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 AL096828.2-201ENST00000567259 1965 ntBASIC13.89□□□□□ -0.19
SNRPEP62304 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.89□□□□□ -0.19
SNRPEP62304 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
SNRPEP62304 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.89□□□□□ -0.19
SNRPEP62304 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.89□□□□□ -0.19
SNRPEP62304 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNRPEP62304 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SNRPEP62304 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.89□□□□□ -0.19
SNRPEP62304 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SNRPEP62304 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.89□□□□□ -0.19
SNRPEP62304 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SNRPEP62304 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 SDHAP1-207ENST00000440850 2000 ntBASIC13.88□□□□□ -0.19
SNRPEP62304 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.88□□□□□ -0.19
SNRPEP62304 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.88□□□□□ -0.19
SNRPEP62304 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNRPEP62304 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 PHGDH-210ENST00000641115 1638 ntBASIC13.88□□□□□ -0.19
SNRPEP62304 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 TNRC18P2-201ENST00000417666 2714 ntBASIC13.88□□□□□ -0.19
SNRPEP62304 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SNRPEP62304 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.88□□□□□ -0.19
SNRPEP62304 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNRPEP62304 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.87□□□□□ -0.19
SNRPEP62304 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SNRPEP62304 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.87□□□□□ -0.19
SNRPEP62304 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.87□□□□□ -0.19
SNRPEP62304 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNRPEP62304 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms