Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 AC087641.1-201ENST00000557561 1021 ntBASIC18.91■□□□□ 0.62
TRANK1O15050 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
TRANK1O15050 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRANK1O15050 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
TRANK1O15050 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRANK1O15050 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRANK1O15050 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.9■□□□□ 0.62
TRANK1O15050 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 AL513210.1-201ENST00000629608 234 ntBASIC18.9■□□□□ 0.62
TRANK1O15050 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.9■□□□□ 0.62
TRANK1O15050 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRANK1O15050 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.9■□□□□ 0.62
TRANK1O15050 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 GAPDHP21-201ENST00000450301 1010 ntBASIC18.9■□□□□ 0.62
TRANK1O15050 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.9■□□□□ 0.62
TRANK1O15050 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRANK1O15050 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.9■□□□□ 0.62
TRANK1O15050 AD001527.2-201ENST00000622994 785 ntBASIC18.9■□□□□ 0.62
TRANK1O15050 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
TRANK1O15050 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRANK1O15050 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRANK1O15050 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRANK1O15050 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRANK1O15050 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 ELK2BP-201ENST00000415014 1224 ntBASIC18.89■□□□□ 0.61
TRANK1O15050 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRANK1O15050 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRANK1O15050 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRANK1O15050 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.89■□□□□ 0.61
TRANK1O15050 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
TRANK1O15050 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.89■□□□□ 0.61
TRANK1O15050 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.89■□□□□ 0.61
TRANK1O15050 PGM5P2-202ENST00000637225 1043 ntBASIC18.89■□□□□ 0.61
TRANK1O15050 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRANK1O15050 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.89■□□□□ 0.61
TRANK1O15050 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRANK1O15050 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.88■□□□□ 0.61
TRANK1O15050 OR7E47P-204ENST00000575924 449 ntBASIC18.88■□□□□ 0.61
TRANK1O15050 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRANK1O15050 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRANK1O15050 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRANK1O15050 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRANK1O15050 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.87■□□□□ 0.61
TRANK1O15050 RHOQP3-201ENST00000437982 621 ntBASIC18.87■□□□□ 0.61
TRANK1O15050 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.87■□□□□ 0.61
TRANK1O15050 AC005225.4-201ENST00000557330 545 ntBASIC18.87■□□□□ 0.61
TRANK1O15050 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms