Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RTCBQ9Y3I0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RTCBQ9Y3I0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.86■■■□□ 2.69
RTCBQ9Y3I0 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.86■■■□□ 2.69
RTCBQ9Y3I0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RTCBQ9Y3I0 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.85■■■□□ 2.69
RTCBQ9Y3I0 PVT1_1.1-201ENST00000615125 194 ntBASIC31.85■■■□□ 2.69
RTCBQ9Y3I0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 AC018755.3-202ENST00000596210 929 ntBASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
RTCBQ9Y3I0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.83■■■□□ 2.69
RTCBQ9Y3I0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.83■■■□□ 2.69
RTCBQ9Y3I0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.82■■■□□ 2.68
RTCBQ9Y3I0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.82■■■□□ 2.68
RTCBQ9Y3I0 AC131212.1-201ENST00000613771 668 ntBASIC31.82■■■□□ 2.68
RTCBQ9Y3I0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.81■■■□□ 2.68
RTCBQ9Y3I0 AC019069.1-201ENST00000610008 1333 ntBASIC31.8■■■□□ 2.68
RTCBQ9Y3I0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
RTCBQ9Y3I0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RTCBQ9Y3I0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RTCBQ9Y3I0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RTCBQ9Y3I0 GUSBP5-201ENST00000418136 578 ntBASIC31.78■■■□□ 2.68
RTCBQ9Y3I0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.78■■■□□ 2.68
RTCBQ9Y3I0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.77■■■□□ 2.68
RTCBQ9Y3I0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.76■■■□□ 2.68
RTCBQ9Y3I0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
RTCBQ9Y3I0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 MIR4508-201ENST00000584178 70 ntBASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 THA1P-201ENST00000590384 1145 ntBASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RTCBQ9Y3I0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RTCBQ9Y3I0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.74■■■□□ 2.67
RTCBQ9Y3I0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RTCBQ9Y3I0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
RTCBQ9Y3I0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RTCBQ9Y3I0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
RTCBQ9Y3I0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
RTCBQ9Y3I0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
RTCBQ9Y3I0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
RTCBQ9Y3I0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RTCBQ9Y3I0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RTCBQ9Y3I0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.71■■■□□ 2.67
RTCBQ9Y3I0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RTCBQ9Y3I0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RTCBQ9Y3I0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.69■■■□□ 2.66
RTCBQ9Y3I0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTCBQ9Y3I0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTCBQ9Y3I0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.69■■■□□ 2.66
RTCBQ9Y3I0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RTCBQ9Y3I0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
RTCBQ9Y3I0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.68■■■□□ 2.66
RTCBQ9Y3I0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RTCBQ9Y3I0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.68■■■□□ 2.66
RTCBQ9Y3I0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RTCBQ9Y3I0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RTCBQ9Y3I0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
RTCBQ9Y3I0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.67■■■□□ 2.66
RTCBQ9Y3I0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.66■■■□□ 2.66
RTCBQ9Y3I0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 AC103724.3-201ENST00000564481 992 ntBASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RTCBQ9Y3I0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RTCBQ9Y3I0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.64■■■□□ 2.66
RTCBQ9Y3I0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
RTCBQ9Y3I0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.63■■■□□ 2.65
RTCBQ9Y3I0 AL031848.2-201ENST00000607670 837 ntBASIC31.63■■■□□ 2.65
RTCBQ9Y3I0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RTCBQ9Y3I0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RTCBQ9Y3I0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.62■■■□□ 2.65
RTCBQ9Y3I0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RTCBQ9Y3I0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.62■■■□□ 2.65
RTCBQ9Y3I0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RTCBQ9Y3I0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RTCBQ9Y3I0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.61■■■□□ 2.65
RTCBQ9Y3I0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
RTCBQ9Y3I0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
RTCBQ9Y3I0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RTCBQ9Y3I0 AP002414.2-202ENST00000590929 1450 ntBASIC31.59■■■□□ 2.65
RTCBQ9Y3I0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms