Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.22■□□□□ 0.67
SDF2L1Q9HCN8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SDF2L1Q9HCN8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SDF2L1Q9HCN8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDF2L1Q9HCN8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.21■□□□□ 0.67
SDF2L1Q9HCN8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SDF2L1Q9HCN8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.21■□□□□ 0.67
SDF2L1Q9HCN8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDF2L1Q9HCN8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDF2L1Q9HCN8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SDF2L1Q9HCN8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SDF2L1Q9HCN8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 LINC00543-201ENST00000567234 1845 ntBASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.19■□□□□ 0.66
SDF2L1Q9HCN8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SDF2L1Q9HCN8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDF2L1Q9HCN8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SDF2L1Q9HCN8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SDF2L1Q9HCN8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SDF2L1Q9HCN8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 RARRES2P7-201ENST00000567349 469 ntBASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDF2L1Q9HCN8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 AC142381.3-201ENST00000568208 1670 ntBASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.15■□□□□ 0.66
SDF2L1Q9HCN8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDF2L1Q9HCN8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDF2L1Q9HCN8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.13■□□□□ 0.65
SDF2L1Q9HCN8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDF2L1Q9HCN8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SDF2L1Q9HCN8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SDF2L1Q9HCN8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDF2L1Q9HCN8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 AC079834.2-201ENST00000609776 1949 ntBASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 AL139125.2-201ENST00000623134 1869 ntBASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.12■□□□□ 0.65
SDF2L1Q9HCN8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 SETD8P1-201ENST00000623146 1180 ntBASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SDF2L1Q9HCN8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 AC018358.1-201ENST00000631079 1402 ntBASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SDF2L1Q9HCN8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 AC127502.1-201ENST00000399971 1502 ntBASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 AC068473.5-201ENST00000616428 2072 ntBASIC19.09■□□□□ 0.65
SDF2L1Q9HCN8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDF2L1Q9HCN8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDF2L1Q9HCN8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDF2L1Q9HCN8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDF2L1Q9HCN8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SDF2L1Q9HCN8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms