Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.88■■■□□ 2.21
ZFYVE28Q9HCC9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.88■■■□□ 2.21
ZFYVE28Q9HCC9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZFYVE28Q9HCC9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
ZFYVE28Q9HCC9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZFYVE28Q9HCC9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZFYVE28Q9HCC9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
ZFYVE28Q9HCC9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZFYVE28Q9HCC9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZFYVE28Q9HCC9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 AL356441.2-201ENST00000443009 864 ntBASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.84■■■□□ 2.21
ZFYVE28Q9HCC9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 AL031848.2-201ENST00000607670 837 ntBASIC28.83■■■□□ 2.21
ZFYVE28Q9HCC9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ZFYVE28Q9HCC9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
ZFYVE28Q9HCC9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ZFYVE28Q9HCC9 AC100797.4-201ENST00000631653 1827 ntBASIC28.82■■■□□ 2.2
ZFYVE28Q9HCC9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.81■■■□□ 2.2
ZFYVE28Q9HCC9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ZFYVE28Q9HCC9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
ZFYVE28Q9HCC9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.81■■■□□ 2.2
ZFYVE28Q9HCC9 AC103724.3-201ENST00000564481 992 ntBASIC28.81■■■□□ 2.2
ZFYVE28Q9HCC9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZFYVE28Q9HCC9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZFYVE28Q9HCC9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
ZFYVE28Q9HCC9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ZFYVE28Q9HCC9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ZFYVE28Q9HCC9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.79■■■□□ 2.2
ZFYVE28Q9HCC9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.79■■■□□ 2.2
ZFYVE28Q9HCC9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.79■■■□□ 2.2
ZFYVE28Q9HCC9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ZFYVE28Q9HCC9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ZFYVE28Q9HCC9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.78■■■□□ 2.2
ZFYVE28Q9HCC9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZFYVE28Q9HCC9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC28.77■■■□□ 2.2
ZFYVE28Q9HCC9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.77■■■□□ 2.2
ZFYVE28Q9HCC9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
ZFYVE28Q9HCC9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
ZFYVE28Q9HCC9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ZFYVE28Q9HCC9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ZFYVE28Q9HCC9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.75■■■□□ 2.19
ZFYVE28Q9HCC9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ZFYVE28Q9HCC9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZFYVE28Q9HCC9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC28.73■■■□□ 2.19
ZFYVE28Q9HCC9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZFYVE28Q9HCC9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZFYVE28Q9HCC9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.73■■■□□ 2.19
ZFYVE28Q9HCC9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZFYVE28Q9HCC9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZFYVE28Q9HCC9 MIR935-201ENST00000401179 91 ntBASIC28.72■■■□□ 2.19
ZFYVE28Q9HCC9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
ZFYVE28Q9HCC9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZFYVE28Q9HCC9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
ZFYVE28Q9HCC9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZFYVE28Q9HCC9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZFYVE28Q9HCC9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
ZFYVE28Q9HCC9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
ZFYVE28Q9HCC9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ZFYVE28Q9HCC9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
ZFYVE28Q9HCC9 AC239859.2-201ENST00000444165 318 ntBASIC28.69■■■□□ 2.18
ZFYVE28Q9HCC9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.69■■■□□ 2.18
ZFYVE28Q9HCC9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.69■■■□□ 2.18
ZFYVE28Q9HCC9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.69■■■□□ 2.18
ZFYVE28Q9HCC9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZFYVE28Q9HCC9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ZFYVE28Q9HCC9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.68■■■□□ 2.18
ZFYVE28Q9HCC9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.67■■■□□ 2.18
ZFYVE28Q9HCC9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
ZFYVE28Q9HCC9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ZFYVE28Q9HCC9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.65■■■□□ 2.18
ZFYVE28Q9HCC9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 AC008406.3-201ENST00000620001 1374 ntBASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZFYVE28Q9HCC9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
ZFYVE28Q9HCC9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ZFYVE28Q9HCC9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
ZFYVE28Q9HCC9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ZFYVE28Q9HCC9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ZFYVE28Q9HCC9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms