Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.13■■■□□ 2.41
UPF2Q9HAU5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
UPF2Q9HAU5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
UPF2Q9HAU5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
UPF2Q9HAU5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
UPF2Q9HAU5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
UPF2Q9HAU5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
UPF2Q9HAU5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UPF2Q9HAU5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.1■■■□□ 2.41
UPF2Q9HAU5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
UPF2Q9HAU5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.09■■■□□ 2.41
UPF2Q9HAU5 AC142472.1-201ENST00000612013 1741 ntBASIC30.09■■■□□ 2.41
UPF2Q9HAU5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
UPF2Q9HAU5 SUZ12P1-203ENST00000578195 985 ntBASIC30.07■■■□□ 2.4
UPF2Q9HAU5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
UPF2Q9HAU5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.06■■■□□ 2.4
UPF2Q9HAU5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
UPF2Q9HAU5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
UPF2Q9HAU5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
UPF2Q9HAU5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.06■■■□□ 2.4
UPF2Q9HAU5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
UPF2Q9HAU5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
UPF2Q9HAU5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
UPF2Q9HAU5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.05■■■□□ 2.4
UPF2Q9HAU5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.05■■■□□ 2.4
UPF2Q9HAU5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.04■■■□□ 2.4
UPF2Q9HAU5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.04■■■□□ 2.4
UPF2Q9HAU5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
UPF2Q9HAU5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
UPF2Q9HAU5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.03■■■□□ 2.4
UPF2Q9HAU5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.03■■■□□ 2.4
UPF2Q9HAU5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
UPF2Q9HAU5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
UPF2Q9HAU5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
UPF2Q9HAU5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
UPF2Q9HAU5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30■■■□□ 2.39
UPF2Q9HAU5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30■■■□□ 2.39
UPF2Q9HAU5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30■■■□□ 2.39
UPF2Q9HAU5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
UPF2Q9HAU5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
UPF2Q9HAU5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
UPF2Q9HAU5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
UPF2Q9HAU5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.99■■■□□ 2.39
UPF2Q9HAU5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
UPF2Q9HAU5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 AC093323.1-202ENST00000635031 2045 ntBASIC29.98■■■□□ 2.39
UPF2Q9HAU5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.98■■■□□ 2.39
UPF2Q9HAU5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
UPF2Q9HAU5 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.97■■■□□ 2.39
UPF2Q9HAU5 WHAMMP3-201ENST00000611636 1609 ntBASIC29.97■■■□□ 2.39
UPF2Q9HAU5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
UPF2Q9HAU5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
UPF2Q9HAU5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.96■■■□□ 2.39
UPF2Q9HAU5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
UPF2Q9HAU5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
UPF2Q9HAU5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.95■■■□□ 2.39
UPF2Q9HAU5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC29.95■■■□□ 2.38
UPF2Q9HAU5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
UPF2Q9HAU5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
UPF2Q9HAU5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
UPF2Q9HAU5 AC110285.7-201ENST00000624417 1536 ntBASIC29.94■■■□□ 2.38
UPF2Q9HAU5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.94■■■□□ 2.38
UPF2Q9HAU5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
UPF2Q9HAU5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
UPF2Q9HAU5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
UPF2Q9HAU5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
UPF2Q9HAU5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UPF2Q9HAU5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.92■■■□□ 2.38
UPF2Q9HAU5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UPF2Q9HAU5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
UPF2Q9HAU5 DUX4L28-201ENST00000623687 678 ntBASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms